EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM028-24635

Organism

Mus musculus

Tissue/cell

Cerebellum

Coordinate

chr5:123250640-123251920

Target genes

Number: 13
Name	Ensembl ID

Vps29	ENSMUSG00000029462
1500011H22Rik	ENSMUSG00000029463
Arpc3	ENSMUSG00000029465
Atp2a2	ENSMUSG00000029467
Ift81	ENSMUSG00000029469
P2rx7	ENSMUSG00000029468
P2rx4	ENSMUSG00000029470
Camkk2	ENSMUSG00000029471
Anapc5	ENSMUSG00000029472
Rnf34	ENSMUSG00000029474
A930024E05Rik	ENSMUSG00000056735
Orai1	ENSMUSG00000049686
Tmem120b	ENSMUSG00000054434

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Klf12	MA0742.1	chr5:123251424-123251439	GACCACGCCCTTAGC	+	6.47
STAT3	MA0144.2	chr5:123251223-123251234	TTTCCCAGAAG	-	6.62
Stat4	MA0518.1	chr5:123251220-123251234	TCCTTTCCCAGAAG	-	6.13

Enhancer Sequence

ACTAAGGGGA CAGATATACC CACGACCCAA GATAGAGATT ACATGACAGA ATTTGTTTTG 60
CTCTTCAGAA ATGTGGTGGA TTTCACATTT CAGCACATGC ACAGTGACAG CTCTACTTAA 120
AGAACCTATG ACCTGACCTC AGCCCTGACC CATGAGAGCT ATGTTCCTGA AACGCTAGGG 180
CTGAAAGAGA AGCAGAGGGT ACATGGCAAA GAGCCAGACC TTCAGCATTA GGTAACCTGG 240
ACTTAGACAC TGCCTCTGCT ACTTACTGTG TGACTTAGGG CCAGTCACTT AGCTTCTTAG 300
CTAAGCCTCA GCTTCCTCAT CTGTAAAATG GGCATCAAAC CTATCATAGA GAACCGTGGT 360
AAGGATTACA ATGAGATAAT AGAGCAAACA GTGCTTGCAT ATTAGGTAAC AGGACATAAA 420
GGGAAGGACG CCTGTCATGA GCAACAAGTT CTCTTCTTAG CTTCTGTCTG GGATTCTCCT 480
CGAGGGTAAG AAGCCCATCT AAACAAGCCG TTTAAATCCA CAGCTAGAGT ATCTTTATCA 540
GTCTATAAAG AGCCACTTCA ATTCAGTCCA TGTGTTTCTT TCCTTTCCCA GAAGAAAGCA 600
CACAGGTAAT GCACAGACTG AACAAACATT ACTGTAAGTT GTTCTCAATC TTGCTGCAAA 660
CTTCCAGAGA ATGGGCGGAA GAGATCTTAT GGTCTATGGT CACGGATTCA GCAGAGGCTG 720
AGACAGAATA ATGTTCTTCC AATAGCAGTC TACACCCCAA AGCCAGTCCT ACTTTCTGCA 780
CACGGACCAC GCCCTTAGCA CGGCTTCTGT GTCACTGAAG TAACAACTCA GCCTCTTCCT 840
GTCATGCAGA ATGAGAGGAA CAGGTCTTCC CGTCAGGCTT ACGAGTTAAA ACAAGGGTCA 900
GCAAACTTTT TAGCAAGGGT GAGAGCAGAT TTCATGTTGC AGGCCACACT GGTCTCTGCT 960
CAGTTGTGGC TGTTCTCCGG CTCCGTCCAT CTAAACATGT AAATGTTTTT TGGCTCAACA 1020
GCTGTATGCA GACGAACAGA GCACCAGACT TAATACACAA GCTGTAGTTT GCCAACCCCT 1080
GGTTTAACTT CAGCGTTCCC AGGGCTGGAG ATGTAGCTCA GTGGCACAGC ACTTGCCTAG 1140
CGTGTATGAG GTGCTGAGTT CTATCCCCAG TACTAGAAAA GAAGAAAAAA GCCCATTTCT 1200
ACAAATTGCC TAAGTGCAAA TGTACTAAGT GTTGCTCAAT AAATTAAACA AAGATCTCTT 1260
ATCAAGTCGA TAAGTGGAGC 1280