EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM028-24593

Organism

Mus musculus

Tissue/cell

Cerebellum

Coordinate

chr5:122793680-122794200

Target genes

Number: 20
Name	Ensembl ID

Cux2	ENSMUSG00000042589
Myl2	ENSMUSG00000013936
Ccdc63	ENSMUSG00000043036
Ppp1cc	ENSMUSG00000004455
Hvcn1	ENSMUSG00000064267
Tctn1	ENSMUSG00000038593
Pptc7	ENSMUSG00000038582
Gm15842	ENSMUSG00000083909
Rad9b	ENSMUSG00000038569
Vps29	ENSMUSG00000029462
Gpn3	ENSMUSG00000029464
1500011H22Rik	ENSMUSG00000029463
Arpc3	ENSMUSG00000029465
Anapc7	ENSMUSG00000029466
Atp2a2	ENSMUSG00000029467
P2rx7	ENSMUSG00000029468
P2rx4	ENSMUSG00000029470
Camkk2	ENSMUSG00000029471
Anapc5	ENSMUSG00000029472
Rnf34	ENSMUSG00000029474

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

POU2F1	MA0785.1	chr5:122793735-122793747	AATTTGCATAAA	-	6.11
Pou2f3	MA0627.1	chr5:122793732-122793748	ATCAATTTGCATAAAA	-	6.15
SMAD3	MA0795.1	chr5:122793794-122793804	TGTCTAGACG	-	6.02
STAT1	MA0137.3	chr5:122793705-122793716	TTTCCTAGAAA	-	6.14
Stat4	MA0518.1	chr5:122793702-122793716	CCATTTCCTAGAAA	-	7.31

Enhancer Sequence

TTCTAGGACA ATATTGCTCA GTCCATTTCC TAGAAAACAA TAGAATAAGA CAATCAATTT 60
GCATAAAAAT GTTCCAATGT CCTCAGGCTG CGAGTCCTAG GGCCTGTGTG AAGTTGTCTA 120
GACGTGAAGT CTCACAACCG AGTTTCCTCT TTGGCTGGAT TGAAGTGTGA AGCCTTGGGT 180
GGTGTATTTC AGAGCTCTTG GCTAATAATT TGCTGCCTTT AAGCAGCTTG TCACCTGTCT 240
TTCTAGAGTT TCCTCCTGAC AATGTCAGTG ATTGTTCTAA ATCACGTGTT AGCCTTTTTA 300
AAAAGCATAA CTGGCTAGGA AGCTCTAGGA GGAAGTGGGA GTAAGACAGG GTGGTGAGTG 360
TGGCCAAAGT GCAATGTACT CAGTGTGAAA TGTCACACAG AACCCCAGCA TTTTGTGTGC 420
CGCCTTAAAA ATAATCTTAA AAAGGAAAGA CAAGCTCTGG GGTAAATTGT TCGGTGCACA 480
AGCACGTTGT GTTCCGAAGA GAAAGAGGCA TCAGGAGACC 520