EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM028-24368

Organism

Mus musculus

Tissue/cell

Cerebellum

Coordinate

chr5:116029900-116030510

Target genes

Number: 20
Name	Ensembl ID

Gm13826	ENSMUSG00000072692
Cabp1	ENSMUSG00000029544
Pop5	ENSMUSG00000060152
Rnf10	ENSMUSG00000041740
Coq5	ENSMUSG00000041733
Gm13829	ENSMUSG00000082610
Dynll1	ENSMUSG00000009013
Gm13830	ENSMUSG00000086368
Srsf9	ENSMUSG00000029538
Gatc	ENSMUSG00000029536
Triap1	ENSMUSG00000029535
Cox6a1	ENSMUSG00000041697
Msi1	ENSMUSG00000054256
Sirt4	ENSMUSG00000029524
U4	ENSMUSG00000075998
Pxn	ENSMUSG00000029528
Gm13840	ENSMUSG00000086849
Rplp0	ENSMUSG00000067274
Gcn1l1	ENSMUSG00000041638
Ccdc64	ENSMUSG00000041609

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

PBX1	MA0070.1	chr5:116030389-116030401	TATGATTGATGG	-	6.37
RREB1	MA0073.1	chr5:116030035-116030055	TGTGTGTGTGTGGTGTGTGT	-	6.16
TCF3	MA0522.2	chr5:116029934-116029944	AGCAGGTGTT	-	6.02

Enhancer Sequence

GAAAGTAGGT TCCTGCTGAG TAGTGGTTGG GGGGAGCAGG TGTTGGCATG CAGTCCTGTT 60
CCTATTGGCT TGGCAACAGG AGGGCTTGTG CTGTGAGTGT GATGTGTAGT CACTGTCAAC 120
TGAGGGGTAT TTGTGTGTGT GTGTGTGGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG 180
TGTGTGTGTG TGTGTGCACG CGCGCGCGCC CACAGAGGCC AAGAAAAGGC ATCAGAACCC 240
TGGCACTGGA GTCCTGGGTC GATGTGAGCT GCCTGCTGTG GGTCCTGGAA GAGCAGCTGC 300
CACTCTTCAG TGCCGAGCCA CTGCTGTAGC CCTAGCAGGT GCTGTCTCAT TGGAGACCTG 360
GAAAAGTCTC CACTTAGAGT ATTTCCACAA TTATTGAGGC TGGCGAACTT CCTGGAGACC 420
ATTGCAAGTA GTAACCCTTT CTCCATACAG TTTGGACTTG ATGTGAAGAG CAGAGCCCTG 480
GCTCAAGGGT ATGATTGATG GCTTTGTGGC CTTGTCAAGA TGAAAGGCGA GCTTGTCATC 540
ACACAGCTAA CCAGGCTGGG CAGAACGGGC ACCAGCTCTT GAAACTGACG GCTTGTGCTT 600
TCTGTCCCCT 610