EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM028-23508

Organism

Mus musculus

Tissue/cell

Cerebellum

Coordinate

chr5:33127240-33128190

Target genes

Number: 8
Name	Ensembl ID

Ppp1cb	ENSMUSG00000014956
Yes1	ENSMUSG00000014932
Pisd	ENSMUSG00000023452
RP23	ENSMUSG00000093574
C330019G07Rik	ENSMUSG00000054280
Depdc5	ENSMUSG00000037426
Slc5a1	ENSMUSG00000011034
Ctbp1	ENSMUSG00000037373

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Gfi1b	MA0483.1	chr5:33127623-33127634	AGCTGTGATTT	-	6.14
Klf12	MA0742.1	chr5:33128014-33128029	GGCCACACCCATTTC	+	6.05
Klf1	MA0493.1	chr5:33128014-33128025	GGCCACACCCA	+	6.62

Enhancer Sequence

ACTCTGTCTC AAAAAACCAA AAAAAAAAAA AAAAAAAAAA AAAAAGTACC AGAGTTTGGT 60
TCCCAGCATA CATGTCAGAT GGCTCTCAAC CACCTGTAAT TCCTCCAATT CCAGGAGACT 120
CTTGATGGTC CTATGGACAC CTGCAACCAC CCATATGCAT ACACACACAC GGTGTAAAAA 180
GGTAGAAGTA GTCTTTGCCA AAAAGAAATA AGTATGTAGG CTATTAAGTA ACTCAGCCAA 240
GTTGAGAACT GTTTCTTCTC TCTCATTTGG GTTAAGAACT CTCTCCTCTT CTCCCCTCCT 300
ACCCTTCAAA AAAGAATAAA CAGCTGAAAC ATGCCAGTAA TCTCGGCTTT TTGGAAGCAC 360
TTGGGAGGCT GAGGCAGGGG GATAGCTGTG ATTTCGAGGC CAGCCTGGGT TACCTAATGA 420
AACTGTCTGG AGCAGACAAA AAGCCAAATG AACAGTCACA ATAGATGCCT CATGTCGCTC 480
TCCCACTTCT AGCTGCCTAG GAACTTAAGT AACCCAGACG TTTGGGGTCA GCAGGATAAG 540
GACCACAATT CCACCACAGA CTTTTCAGAT AAAGAAACCT AATTCTTTCG CCTCAAAGCT 600
TTAGAACCCC AAGTGAAGGT CGCTTTGCCG TGCCGTGCTC TTCCAGGTTA CACCAGCCTG 660
GTAGGAAGGC AAACACCCGT GAAAAGGAGA TCGACTCTGC TTCCACTCTA GAGACCAGCG 720
GGCAGCAGAA TATGGTGGGT TTGGTTGTCC CTGTGCACTT TCACCCAGCC TTTAGGCCAC 780
ACCCATTTCA CGGTCCACGC GGTGGCTTGT AGCACCTGTT CTGAAGCCGA AAGGTGGCTC 840
CGTGTCCTTC CTGTCAGACC TACTCGCGGC GAGCCGGCGA CGAGAACTGG CTTCGCTCTC 900
AGAGCCTGGC TTGGTCTGTG CTGATCCCTA CCCCAGCAGC CTCCCGCCCG 950