EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM028-23287

Organism

Mus musculus

Tissue/cell

Cerebellum

Coordinate

chr5:23853000-23854120

Target genes

Number: 20
Name	Ensembl ID

Gm3724	ENSMUSG00000061468
Nupl2	ENSMUSG00000048439
Gm9836	ENSMUSG00000081071
Kcnh2	ENSMUSG00000038319
Nos3	ENSMUSG00000028978
Atg9b	ENSMUSG00000038295
Abcb8	ENSMUSG00000028973
Accn3	ENSMUSG00000038276
Cdk5	ENSMUSG00000028969
Slc4a2	ENSMUSG00000028962
Fastk	ENSMUSG00000028959
Tmub1	ENSMUSG00000028958
Agap3	ENSMUSG00000023353
Abcf2	ENSMUSG00000028953
Gm10221	ENSMUSG00000067719
Chpf2	ENSMUSG00000038181
Smarcd3	ENSMUSG00000028949
Nub1	ENSMUSG00000028954
7SK	ENSMUSG00000089475
Rheb	ENSMUSG00000028945

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EWSR1-FLI1	MA0149.1	chr5:23853309-23853327	GGATGTAGGGAAGGAAGC	+	6.18
PKNOX1	MA0782.1	chr5:23853843-23853855	TGACACCTGCCA	-	6.02
PKNOX2	MA0783.1	chr5:23853843-23853855	TGACACCTGCCA	-	6.27

dbSUPER

Number of super-enhancer constituents: 3
ID	Coordinate	Tissue/cell

mSE_04835	chr5:23853901-23860358	E14.5_Heart
mSE_10860	chr5:23853525-23855306	Olfactory_bulb
mSE_12993	chr5:23849007-23855222	Thymus

Enhancer Sequence

CCACCACTTT ATCCTCTACC TGCCTGCAAG CCAGAACTGC AATTTGTGCA GGCAAACTCT 60
CAAACAAAGG GCCACTGGTA GTGCAGATCC TCTGAATGTT GTCCAAAGAC ATCACAGACT 120
ACACACCTGC AAAGGAAGCC CCTTAAGGAA ACCACCCTGG AGCATGCACA TCAGAGGCCT 180
GTAGCTTGCA GGGTCCTTTT GCCACAGCAA GAGGCAGGGT GTGCTCACTG TGGCTAGGCA 240
ACTGGCTCCC TGAGAGCAGG AACTTTGTTT TTCCTGTAGG CAGATCTATG TTCAAGAGCT 300
GGGTTCCAGG GATGTAGGGA AGGAAGCTCA TTGGTGAATA TCTGGAGCCC CTTCCGAGCC 360
CTCCACTACC CACTACCTCA CCACCTCACT GACCTCCCTG AGCAGAACCC ACCCAGGCGC 420
ACAGGCCTAG TGAAAGAACA GCTCCACCCA CCCAGTGTGT TTATCCACTC TCCACTTTGC 480
TCTCCGGAAG CCCAGAGCAG CTGGCTTGGG AGGTGGTGGC TGAGCAGAGA CACCTGGCTA 540
GCAGGGAGTT GAGGGGAGGG GCAGAGTGTT CTGCAGACCA GACAAAGGTA ACTTAAGTTA 600
CGGGAAGAGG TGTCGTTGAA CGCAGAGAGA GGAAGGCAGA AGATGGCAGC AGATACAATC 660
CTTCTGCCCC GCACTCCATT TCTTCCAGAA AGTCACCTGG CACAGGATGC CCTTCAGGTA 720
GCTAGAATCC TGTGACTAAG ACCCAGAGCC AGCGCCAGGC CCCACCTTGC CCTATTACCA 780
CTATCCACGC CCATACCTAC CATCCCGGCT TAGTCAAATG TCAGCCTACC AAGCTCAACA 840
TAATGACACC TGCCAAGGAG TAAAGTACTG AGAGATGCCA GGCCCCCTCA GCCTTAGTAC 900
CTCCAAGGCC ATTCGGAACG CCCACCCACC AGAGTTGACA CTAAGGCCAC ACCGGTTCCT 960
AGACATCGGG CCACGCCCAT GCCTGGAGGG TTCCGCCCCC AAGGGACTCG CAAGGTTCGC 1020
CAGCCTCCAG CAACTACAGA TCCCACCCCA ATGCACCTCC ACCCCGCATC CACGCTCCTT 1080
CTCTGGAGGC CCGGCCCCTC GCCACAGCCA CGCCCCGGCC 1120