EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM028-22815

Organism

Mus musculus

Tissue/cell

Cerebellum

Coordinate

chr4:149102360-149103640

Target genes

Number: 15
Name	Ensembl ID

Kif1b	ENSMUSG00000063077
Ube4b	ENSMUSG00000028960
Rbp7	ENSMUSG00000028996
Gm13072	ENSMUSG00000070572
Nmnat1	ENSMUSG00000028992
Lzic	ENSMUSG00000028990
Gm13071	ENSMUSG00000083811
Ctnnbip1	ENSMUSG00000028988
Gm13066	ENSMUSG00000086949
Clstn1	ENSMUSG00000039953
Pik3cd	ENSMUSG00000039936
Tmem201	ENSMUSG00000044700
Gm13068	ENSMUSG00000085403
Slc25a33	ENSMUSG00000028982
H6pd	ENSMUSG00000028980

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

HSF4	MA0771.1	chr4:149102585-149102598	TTCTAGATCGTTC	+	6.04
SPDEF	MA0686.1	chr4:149103092-149103103	CACATCCGGGT	-	6.32
STAT1	MA0137.3	chr4:149103533-149103544	TTTCCCAGAAA	-	6.02
STAT3	MA0144.2	chr4:149103533-149103544	TTTCCCAGAAA	-	6.32
Stat4	MA0518.1	chr4:149103530-149103544	CTGTTTCCCAGAAA	-	6.14

Enhancer Sequence

CTGAGGGAGG GAAGAGATGG GTCAGTGAAA AGCCAGAAAG GCACCAACAG CTACCCTATG 60
CCCACATGTG GGATGCTGGC CAGTCCTGTT TCCATGCCCT TGCTCTGATG CTCAGGGACC 120
ACTGCCTCAT CCCAGGCTAT TGCCTCACTA TGATAGGTCT GTGGGAGAGG GAGGGGCTCT 180
GCTGCCTCCT TTAGAGAAAC ATTTCTACAC ACTGGGATTT TGTGCTTCTA GATCGTTCAA 240
TCATTCTGTC AAGTTTTTAT CAAAAAGTCC TATTACACTT GACTAGAATG CCAGTAAGAT 300
ATAGCGACAA CTCTGGAAAA AGCTCATTAA TTTTTTGTTA GGGCTGGAGA GATGGCTCAG 360
CGGTTAAGAG CACTGGCTGC TCTTCCAGAG GTCCTGAGTT CAATTCCCAG CAACCACATG 420
GTGGCTCACA ACCATCTGTA ATGAGATCTG ATGGCCTCTT CTGGTGTGTC TGAACACAAC 480
TACAGTGTAC TCACATACAT GAAATAAATA AATAATCTTA AAAAATTTTT TTTTGTTTGC 540
TAAGTTATTC AGACTAAAAC CCAAGAAGCT AGAATAAGAA CCAAAGGTCT GAGGTCTGAG 600
GACAGGAGCC ACCTGTTCTT TTGAGCAGAC ACAGGAGAGT AGGGACAGAG GTAGTGTGTC 660
CTCACGGTCA GTGGCCAACT ACAGAATGGA AATGACAGAG CCAGCAGACA CAGGCCACAT 720
CTGACAGGAA GTCACATCCG GGTGGAGGAG GAGCTTCCTT GCGGAGTCTC TGCTGCGCAC 780
TCGCTGTTCT GACTGATCTT CTGCATGCAG ACAGGCTTCT CACTGCTAGG CTGCGGTCCT 840
GCTTACTCCT TTATTACTGC TTAAAAGCCC AGACCATTCA CTTACACGCT GTAACGCACA 900
TCTGGGTCTG ACCCCTGGCA CTGGTGTGCA TTGTGTGTGT AGCCCCTGGC AAGCATCTCA 960
GCCCCACCCT TGGTTCCCAC AGCCGCGACC AGAGCCCCAG TGCTCGGGTT ACCGAATTGT 1020
GAGGCTGCCA TGAGGAACGA ATACAGGGTG TCTAGAAAGT AGAGGGTCAG CAAGGCAGCC 1080
TCAGAGCAGG CAAGTAGCAG CCACACCACC ATCCTAGACA CTCTTAGGAA GACCGCATCC 1140
AGCTGGTGAC AGCAGGGGGC CACCAGGCAG CTGTTTCCCA GAAAAGGAGT CTTGGCACAC 1200
TGCACTATGC CCCACACTAG GGCCCAGCTC CCAGACCATC TTCCCCCCCG ACACCCAACA 1260
CCCAAATGTC CCACGGCCTC 1280