EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM028-22808

Organism

Mus musculus

Tissue/cell

Cerebellum

Coordinate

chr4:149048380-149050020

Target genes

Number: 15
Name	Ensembl ID

Kif1b	ENSMUSG00000063077
1700121F15Rik	ENSMUSG00000085286
Ube4b	ENSMUSG00000028960
Rbp7	ENSMUSG00000028996
Nmnat1	ENSMUSG00000028992
Lzic	ENSMUSG00000028990
Gm13071	ENSMUSG00000083811
Ctnnbip1	ENSMUSG00000028988
Gm13066	ENSMUSG00000086949
Clstn1	ENSMUSG00000039953
Pik3cd	ENSMUSG00000039936
Tmem201	ENSMUSG00000044700
Gm13068	ENSMUSG00000085403
Slc25a33	ENSMUSG00000028982
Eno1	ENSMUSG00000063524

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Myog	MA0500.1	chr4:149049286-149049297	AACAGCTGCAG	+	6.02
Stat6	MA0520.1	chr4:149049632-149049647	CGGTTCCAGAGAAGT	+	6.04
Tcf12	MA0521.1	chr4:149049286-149049297	AACAGCTGCAG	+	6.62
ZEB1	MA0103.3	chr4:149049123-149049134	GGGCAGGTGGG	-	6.14

Enhancer Sequence

GGCTCAGTGG CCGTGCCTGC CTAACATGCA AAAAGCCCCC AGCACTGAAG GAAGGGCCAT 60
TTCATCTCAG ATTCCCTTCT TGTAAGACAA CCCCACTTTG CTGGGTAGGC CTTTCTCGAT 120
ACCTGTGTCA ACCCCAGCCC AGTTCCCGTT GGTAGCATAG AAGTAGTATA CACCACAGGG 180
GTATCCCCAG ACCTGACGCA AGGGTATACA CAGATGGTCT TTTATTGCTG CTGGTTGGTT 240
TTTTAAGTAC AGTTAGTTGA TCGGAGCCAT GCCTAAGTTT GAATTCCATT GCGTGGCTGA 300
AAAGGTAAAA GGAGAATGGA ATTCAGATTT AGGCTCAGAT CCTCGTGCAC TTCAGACCTT 360
CATTCCCCAA AGCCAAGTCG AAGTAAAATT CAACTGCTGG GTTAGAGATG AGAAGGTCAG 420
CTGTGAGAAG AGCGGTGTTT CCTCTCCACC TTGGGCACAC CTAGAAATAA CCTACTCCCT 480
GAGAGAGAAA TAACGGACAC CCTACTCCTG CACAGTGGGG CGACTTGAGC CTCGATTCCG 540
TTAGGTTGAG TAGGAGAGGC TGCTGAAGAC GCACAAGGCA ATCCATTAAT TACTGGCTTC 600
TCCATGAGAC AAAAGCAAAG CCCTCAGGAG TCCCCTGGAA AGTGTATACT ATAGACACAC 660
ATTTCCCTGG GTCCAAGCTG AATTCCTCTA ACCGGCCAGA CCAGACCCAA AAAGCAAGCT 720
CAGCAACCCT GCAGCAGGAG CCTGGGCAGG TGGGTGTGGA TACACCCTTT GGTTTAGCAA 780
CCAGGGAGGA CCACTAGGGC TTTCCAAGAA AACTATCAGC AGAGCCACCC GAGGCTTGGG 840
TCAAGGACTA AAGGAAATAA CTTACACGCT GTCCAGTGAA AATAACAATA CTAAGAAAGC 900
AAGGCAAACA GCTGCAGGAC AGAGCCAGGG AAGCAAGAAG TTAAGTGCTG AAAGAAAGCG 960
CTTTGAAAAG GGGAAAGACA AAGCAGAAAG CATGATGGAG CCCAGAAGAT TGCATCCTCA 1020
GGAATTCAGG ACGGGAGATA AGGAGCCAGG AAAAAATGCA CCCGGGATTA TTCAGGCAGG 1080
GCTAAGTCCC ATGGCGGAAG ACCAGTAGGA CCTCCGAGCC TGGGTATGAC TTCGGTTAGC 1140
CCCTCTTGGT TCAAGGGCAA AGCTAGGGAT GGAGCGGGAG CGAGCCGACT GATGGGTAAG 1200
GGAATCGGGG ACAGGGGGAG GGGGTGGACG GGGAGCGCGC ACCGAACTGC TTCGGTTCCA 1260
GAGAAGTAAA CAGCTCGTCC TCCTAAGCAA AGCGCGTCCT CCTTGGGAGC CCACTGAGGG 1320
TCTGGCATCA AGGGCGGCAG GAGACACACC CAGATTTCAT CCTTAGAGTG TCACAAAAAG 1380
ATGCAACTCA GCACTTCCCC CATCACACAC ACACACACCA GGGAATTCCA AGCAGGCTCA 1440
ACCCTGTGTA TGAATCGGCC TCTCCAGTGG GGTGCTATCG CCTCTGGATG CTCCGCCACC 1500
CTGGAACCCT AATGAACTCC CTCCCACCCT GTCCACCCAA ACCCAGGCCG ACAAAGCCCG 1560
GTGTTAGGCG GGGCAGAGCA TCTGGCCAGT TAGAGGAGAC ACAGGGATCC CACAGACTCC 1620
CGCACAGGTG GGTTTCGTAC 1640