EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM028-22196

Organism

Mus musculus

Tissue/cell

Cerebellum

Coordinate

chr4:130002460-130004430

Target genes

Number: 12
Name	Ensembl ID

Col16a1	ENSMUSG00000040690
Pef1	ENSMUSG00000028779
Tinagl1	ENSMUSG00000028776
Serinc2	ENSMUSG00000023232
Fabp3	ENSMUSG00000028773
Gm10570	ENSMUSG00000073752
Zcchc17	ENSMUSG00000028772
Snrnp40	ENSMUSG00000074088
Nkain1	ENSMUSG00000078532
Pum1	ENSMUSG00000028580
Sdc3	ENSMUSG00000025743
Laptm5	ENSMUSG00000028581

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

HOXA13	MA0650.2	chr4:130003919-130003930	ACCAATAAAAC	+	6.32
SP1	MA0079.4	chr4:130002896-130002911	GAAGCCACGCCCTCT	+	6.18

Enhancer Sequence

GCTGAGATGA CAGGTGTGAG CAATCAGCCT GGCTCCCTTG ATGCTGTAAT CTTTTTAAAG 60
ATATTCTTTT TTTTTTTTTC AATTATGTTT ACTGTATCTA TGTATGTCTG TGATGCAGGG 120
CACCGAGGCC AGAGGTATCA GACTTCTCTG GAGTGAGAGT TACAGGTGCC TGTAGCTGAC 180
ACATGACATG GGAGCTGGAA ACTGAACATG GGTGCACTAG ACAGCCAGCT CTTACCCAGT 240
GAGTCATCTC TCAGACCTCT CCCCTCTTTG GAGAAGAGTA ATTTATTTTC ATTTTACATG 300
TATGGGTGTT TGGCTTGCAC AGAAGCATGC TCACCACATG CATGCAGTGC CCCTGGAGGC 360
CAGAAGAGGG TCTCAGATCT CCTGGAGTCA CCTGGAGTTA CAGGTGGTTG TGAACCACCA 420
TTGGGTACTG GCAACAGAAG CCACGCCCTC TGCAGGAGCA GCCAGTGCTC TTAATTACTG 480
AGCCTCAACT CACTGAGCTT AACCCAGGAA CATACACAAA GAAAGGTAAG GAGGTATACA 540
GCCTAGAGCT GAAGTTGAAA GTTGACAGTC TAAGTATCTA ATAGCAATGA ATTAAATTAA 600
TGATTATACC TAAGCGCAGA GGTGCACTTG GAAGGAGGAT CTAGAGTTTA AGGGCATCCT 660
TGGCTATATA ACAAGTTTGA GGCCAGTCTG AGCTACAAGA GAACCTGTCT CAAGAAATAA 720
CCCAATCAAT CAATCAATCA ATCAATCAAT CAATGCTCAC AGTCATAGCA TAAAACTTTA 780
TGTGGCTCTT TTGTTTGCTT GTTTGTTTTG CTTTTTTAAA AAGATTTATT TATTTATTTT 840
ACATATGTGA GTATCCTGTA GCTGTCTTCA GACACACCAG AAAAGAGCAC TGGATCCCAC 900
TATAGATGGT TGTGAGCCTC CATGTGGTTG CTGGGATTTG AACTCAGGAC CTCTGGAAGA 960
ACAGTTAGTG CTCTTAACTG CTGAGCCATC AGCCCCTTTG TCTTGCTTTT TGAGACGGGA 1020
TTTTTCTGTG TAGCCCTGGC TTTCCTGGAA CTCACTCTGT AGATCAGGCT GGCCTGGAAC 1080
TCTTGGGAAT CTGCCATTAC ATGGCTTTTA ACATCAAGCA TTTTAAAAAC ACTTAAGAAT 1140
ACTTAACAAA TTAGGGGCTG GAGAGATGAT TTAGCAGTTA AGAGCACTGG CTGCTATTCC 1200
AAAGGTCCTG AGTTCAATTC CTAGCACCCA CATGGTGACT CACAAATATC AATAGTAAGA 1260
TATAATTCCC TCTTTTGGTG ATCATGAAGA AAGAACACTC ATATATATAA AATATAAAAA 1320
TAAATAAATC TTAAAATAAT AAGAAAAATG AAAAGGTAGA AACTAAACTA TACCTACAAT 1380
GACTATAATT TTATATTATA TGTATATAAT CATCTACTTA TATTGTTGGC TAAAAAAAAG 1440
TTTAGAATAT GCCCAAACTA CCAATAAAAC TCTCTCTGAG GCTGGACAGA TGGCTCAGCG 1500
GTTAAGAGCA CTGACTGTTC TTCCAGAGGT CTTGAATTCA ATTCCCAGCA ACCACATGGT 1560
GGCTCACAAC CATCTGTAAT GGGATCCAAT GCCCTCTTCT GGTGTTTCTG AAGACAACTA 1620
CAGTGTACTT ACACATAAAA ATAAATAAAT CTAAAAAAAC AAAACAAAAC AAAAGAAAAA 1680
CAACTGTCTC TGAAAAGATA AGGAGGGCTT GCTTTTTTTT TTCTTTTGGT TTTTTCGAGA 1740
CAGGGTTTCT CTGTGTAGCC CTGGCTGTCC TGGAACTCAC TTTATAGACC AGGTTGGCCT 1800
CGAACTCAGA AATCCACCTG CCTCTGCCTC CCGAGTGCTG GGCTTAAAGG CGTGCGCCAC 1860
CACGCCCAGC TTGAGGGCTT GCTTTGTAAA TTATTCTCTA CTTCTAAATG CTTACAAGAA 1920
GCATTTGTAT CTGAGGCCTA CCAAACCGTG ACCCATAGCA GCAAGGCAGC 1970