EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM028-22028

Organism

Mus musculus

Tissue/cell

Cerebellum

Coordinate

chr4:126425960-126427120

Target genes

Number: 11
Name	Ensembl ID

Trappc3	ENSMUSG00000028847
Eif2c4	ENSMUSG00000042500
5730409E04Rik	ENSMUSG00000073755
Psmb2	ENSMUSG00000028837
Tfap2e	ENSMUSG00000042477
Ncdn	ENSMUSG00000028833
AU040320	ENSMUSG00000028830
Gm12937	ENSMUSG00000082498
SNORA17	ENSMUSG00000088984
Sfpq	ENSMUSG00000028820
U6	ENSMUSG00000088982

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

ZNF263	MA0528.1	chr4:126426743-126426764	CGTCCCCCCCCCCCATCCTTC	-	6.27
ZNF263	MA0528.1	chr4:126426746-126426767	CCCCCCCCCCCATCCTTCTCC	-	7.57
ZNF740	MA0753.2	chr4:126426746-126426759	CCCCCCCCCCCAT	+	6.07

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_11032

chr4:126426809-126428642

Olfactory_bulb

Enhancer Sequence

CACCTGTGGT CACAAGACCC CAGTGAAACA GAGCTGAACC AGGTACCCTC CTCTGCCTGC 60
CAGTAACAGA ACTCAAGGGA AATCTTGGCC TGTGGGCCCA TTACTTGTGG GCACCGAGGG 120
CCGGTGAAAT GGATGGCTCA GTGGGTACAT GAAAACCTAA GTTTGATTCC TGGGAATCAC 180
AGCGTGAAGG GAGAGACCTG ACTAGCTCTC CAAACTCCAC ATGTGTGCTG TGGCATGCAG 240
GCATCGTCCT TCCACCACGT CTAAGAAATA GATAAACATA ACTTAAGGGG GTGGGGGCAA 300
CAAGCCTACC TCTACCCAAA AACCTAGCAC ATGGGAGGGA TTCACCCCAC AGGGGCTGGT 360
CACCTAGTGG GACCTCAGTG TGGACAATGG AATCAAGTGG GTCTCAGACA GTATGTCTAG 420
TGCTTAAAGA CTCAAGTCAC ATACTCCTAA CTGTACCGCT AAGGTAGCTG GGGAGCCAGA 480
GGAAACGTAA CATTTCCTTA GAGAGGCTCT GAATTGAGGC AGGGAAGGGA AAAAGACTTG 540
CTATCAAGTA GTGAGAGGTC ACCCATGTTT TGGTTTAAAT CAGAAAATAA AATCAGAGCT 600
TAGCATGAGT TGTTGGACAT AAGGCTGGTG AGTCCAGTGG CTGAAGCAGG CCATTAAAGA 660
GACCAATCGC ACCTGACTCC TAAGGGGGCA GAAGAGGTGG CCTTGCAAAT ACAGAGAGTA 720
AAGGACATGG GAGGGGGAAA CAGATTCAGC AGAAACTCCA GAGGCAGGAA CCAGGCCACT 780
CCCCGTCCCC CCCCCCCATC CTTCTCCTGC ATCCTACAAG TTTACTTGGA AGACATGTAA 840
ATACGTAGCC AGGCTGATAT GTGAGACAAT GCTTTAGCGT GAGCAGAACA GTCTGCTTCG 900
ACTTGGTGTG TGATGTGTAG AGTGTGTGTA CTGGAGAGTA TATGTGAGTG GGAGGTTTCT 960
GTGTTGTGTG TGTGTGTGTG CTGTGATCAG AGAGCACATA TGGTGTGTGG TATGGTGCTT 1020
GTGTGGAGGC CCACGGCAGG GAGGGAGAGG GAAGGAGGCT CGGCCACACA CTACTCCTAG 1080
AGCGCTTGCT ACCAGTACCA GCCAGCATGT ACAGCTATGC TATCTCCCAT CACACTCGTA 1140
CGTCCTCTGC GGGCCAGTGG 1160