EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM028-21969

Organism

Mus musculus

Tissue/cell

Cerebellum

Coordinate

chr4:124572290-124573470

Target genes

Number: 16
Name	Ensembl ID

Pou3f1	ENSMUSG00000078236
Utp11l	ENSMUSG00000028907
Fhl3	ENSMUSG00000032643
Sf3a3	ENSMUSG00000028902
Gm12917	ENSMUSG00000083104
Mir697	ENSMUSG00000076271
Inpp5b	ENSMUSG00000028894
Mtf1	ENSMUSG00000028890
Yrdc	ENSMUSG00000028889
1110065P20Rik	ENSMUSG00000078570
Maneal	ENSMUSG00000042763
Epha10	ENSMUSG00000028876
9930104L06Rik	ENSMUSG00000044730
Cdca8	ENSMUSG00000028873
Dnali1	ENSMUSG00000042707
Snip1	ENSMUSG00000050213

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

ESRRB	MA0141.3	chr4:124573316-124573327	TCAAGGTCATT	+	6.32
Esrra	MA0592.2	chr4:124573315-124573326	TTCAAGGTCAT	+	6.62
Esrrg	MA0643.1	chr4:124573316-124573326	TCAAGGTCAT	+	6.02
Nr5a2	MA0505.1	chr4:124573312-124573327	CAGTTCAAGGTCATT	+	6.35
ZNF263	MA0528.1	chr4:124572432-124572453	TCCCCACTTCTCCCCTCCACC	-	6.13

Enhancer Sequence

ACCCGGGGGT AAGGCCGCGC GCCCCATGGG AGACCGTCCC CCACTCCCAG GTGCAGTTCC 60
CTCGCAAGCA TCCCAAGGAA TTCAGGAACC CACGTGACTT TCCCCCCCAA CTCTAATCCC 120
GGATCCAGGT GGTGCCTAGA TGTCCCCACT TCTCCCCTCC ACCCCCTTTG CGAACTCAGC 180
CACCTTGCAG GAGCAGGGAC ACAGGCAGGT TCAGAACGCA GGCAACAGAG TGGTGGCGCT 240
ACTCTGAGTT TCCAGCGGGA TGAAAACCAC CTTTGACATC ACACCCTCCG CATCCTTGAC 300
ATTTTCTTCT GATTTGTCTC TCCTCTGGTG CACACTTTCA AGTAATCCCT CGAGTGCCCT 360
CTGCAAGATG GATAAGCGCA TACGGTGGCT TTCCCATCTG ATTGGTGTGT GACCCTCCTT 420
CCCTGTCTTC TGTGACCCTA CCCTGTCGGT TGGGTTTCCA GCGAGGCCTG GGGTGATTTT 480
CATTCTTTTG TAAGTACCTT GGGTGTAGAG ATGTGCACAC ACAGGGGTGT TTGAATAATT 540
TCTTAGCCTG CCGATGAAAA TGAAGAAACA TAGCCAATAT GATTTCTTTT CACTCTCGCC 600
TGGCTGAAGC ACAGTAGACC CTTTGATCCG AACTTTCTTT TTTCACTCCT GGGGAAGTTT 660
TCTTGGTAGC TGCTTTGAGT GGCCTCCCTA TGTATCTCTT AACCCAATCT TTAAGCCTTG 720
GGTTTTCCAT CCCTTTTCTC ATTCTCACAT TCTCACATCT TGTCACTTTT TCGCTCTTAA 780
TCCCTTTCCT AGGACTTTGA GAGCGATTTC CCAATCTACC TGGTTTTCTG GGACACTTCT 840
GTTCTTTATT GTTTCTGTTG GGACTTAACC CTTGCTATTG CGTTTACATT TTGAACAGGT 900
CAAGGCCTGA GAGTGTAGCT CAAAGGTGTC ACATTTGCCG AGCACGCTAG AGGCATTGGG 960
CTTGTTCACA GGTAGCAAAG AAGGAAGAAA AGAAACAGAG AGGCGTGTCC AATCCCAGCA 1020
CTCAGTTCAA GGTCATTCTG ACACACAAAA TGAATCTGAG CTCAGTCTGG GCCACAGGAA 1080
ACTTTGTCTT AAAGAATAAA AGTGTGGCCA GGCGTGATGG TACACTCCTT TAGTGTTGGT 1140
ACGTGTGAGA GACAGAGACA CGCAGAATCT CTGTTAGTTT 1180