EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM028-21821

Organism

Mus musculus

Tissue/cell

Cerebellum

Coordinate

chr4:117570420-117571800

Target genes

Number: 17
Name	Ensembl ID

Rnf220	ENSMUSG00000028677
Eri3	ENSMUSG00000033423
Dmap1	ENSMUSG00000009640
Gm12844	ENSMUSG00000084260
Slc6a9	ENSMUSG00000028542
Gm17114	ENSMUSG00000091237
Gm20520	ENSMUSG00000091331
Ccdc24	ENSMUSG00000078588
B4galt2	ENSMUSG00000028541
Gm12841	ENSMUSG00000085278
Atp6v0b	ENSMUSG00000033379
Dph2	ENSMUSG00000028540
Ipo13	ENSMUSG00000033365
9530034E10Rik	ENSMUSG00000086554
St3gal3	ENSMUSG00000028538
SNORA70	ENSMUSG00000088303
Kdm4a	ENSMUSG00000033326

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

FOXA1	MA0148.4	chr4:117570973-117570989	TTTTGTTTGCTTAAGC	-	6.42
ZNF263	MA0528.1	chr4:117571505-117571526	CTCTCCTTTTCCTCCTTCCCC	-	6.75

Enhancer Sequence

GGGCCCTAAA ATATAATAAA GATGGAACTT AAGAAAAAAT TATACAAACA GCAACTCAAC 60
CTCATATAGT TATGTGGGAC TGAGAGCCCG CGGGAGACAG CATGGGGCAC ATGAGCAGCA 120
GGAAGCAAGA TAAAGAAACA AAACATACAA AAACCATGAA CTGGGAGAAG CCCAACAGAA 180
AGAGACGGCA GAGTGAAGGA CGGGCCTGCC CCAGCTCCCC CAGGGACCTT CCACCTACTC 240
CCCGTTCCAC CTCAAGCCAG TCCCGCAGTG ATTTCTTGGT GCTCAAGCAA TTCTAGACTC 300
CACAGAGCTT AGGGAACAGT CTCCACACTC TTGCTGTGGC TTTGATTGGC CGGGGTAGCC 360
CTATACTGTT TCTTGGCATA TACTTCCCTA TCACAACCAT CTAAGTGGAG GGCACAGCTG 420
GCTGTAGGTT AGTCCATGGC ACTTCGTTTT GAGGCTTGGC TGGAGGCCCT GGGAAGTCCA 480
GGGCATGAGA CCTCGAGTAA GTGTCCCCTT GAGTTTGATG ACTTTAGGGC TCTTGGTCTG 540
GCTAAGATAA GACTTTTGTT TGCTTAAGCT AAAGTACTCT TATTTAGGCA GGGCAGGACC 600
CTGGGTGCTA CAAGGCTGCC CAGTCATCAG TAGGGCCAGG GGAATAAACT GCATCTTAAG 660
GTAATGAAAG AGAGCTCCAA CCCAGCAAAG TCCCTCCGCA TGGCAGACTT GGGAGATAGC 720
CAGACTCAGG ACTGAGGGCA GCTCAGTATC TGGACATACC AAAAGAGGAA AACAGTCATT 780
GTGTCACCCC ATGCAGGACC CAGCGGGAAG GCAAAGGCTT GAGTTAGACT GAAACTGGAA 840
TAGCAAACCA GGTATGGGGA CTATCGTACC CAACAAGACA ACCAACAACT CTGACAAATA 900
ACAATGTTGG CTCTCCCTGC CTCGGCTTTG ACCAATCCTG GAGGAAGAGC AAGGCTGCTC 960
CCGCCCCTGG CTTCTCCACT CTCAGTGGGA TGTAATAGAA AGGCACCTGC CTGAGATACC 1020
ACTGAGTAGC TGTGTGATCT TGTGTAAGTC ACAGGTGTTC TGTCTCCCCA CCTGTGACCC 1080
ATAACCTCTC CTTTTCCTCC TTCCCCAGGC TACTAGGAGC CACGACCTGA GGCTGATCTT 1140
CTATCTCTGA AGTCTGTGTC ACTCAGGTCC TGGAAAGGTC TGATCTGCCA TATTAGAACA 1200
GTGTTCCTAC TGTTAGAGCA GTGTGGTCAG TGTACCGTTC CCTTACTGCT TGGGCCGGAT 1260
AGGGTGGGAG AAAGGTTCTG GGGGCAGGGA GCCCTCCTTG ATTCAACAGT GCCTGAGACT 1320
GGCCTCATTC TGGACACAGG GACTGTGGTA GAGAACTGTA GTAGAGGAGA TGCAATCCTG 1380