EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM028-21730

Organism

Mus musculus

Tissue/cell

Cerebellum

Coordinate

chr4:109147340-109148710

Target genes

Number: 8
Name	Ensembl ID

Nrd1	ENSMUSG00000053510
Osbpl9	ENSMUSG00000028559
Eps15	ENSMUSG00000028552
Gm12749	ENSMUSG00000083512
Gm12750	ENSMUSG00000085873
Ttc39a	ENSMUSG00000028555
Rnf11	ENSMUSG00000028557
Gm12808	ENSMUSG00000083995

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Crx	MA0467.1	chr4:109147667-109147678	AAGAGGATTAA	+	6.14
LMX1B	MA0703.2	chr4:109148125-109148136	ATTTTAATTAA	+	6.62
RAX	MA0718.1	chr4:109148287-109148297	GCCAATTAAC	+	6.02
RREB1	MA0073.1	chr4:109148621-109148641	CCCCCCCCCACCCACCCCCG	+	7.59
ZNF740	MA0753.2	chr4:109148619-109148632	ACCCCCCCCCCAC	+	6.32
ZNF740	MA0753.2	chr4:109148617-109148630	CCACCCCCCCCCC	+	6.44

Enhancer Sequence

ACTTAATTTT TATAGGACAG AAATTGCATG AAATATTGAC GACAAAGCTT CTATTCTTCA 60
TTTATCTCAG TTATTGAGTA TCTACTATGA GTCAGATGCT AGAGTATAAA AGCACCTGGA 120
AACTGTCCCA AATTCAGCTT GTACAAGGGG AGGAGAACAC ATATGTCAAG GGTGAGACAC 180
ACAACTACCT AAACAAAGAT ACTGCACTAA ATTATTTTAG GTCTGGTACT GCTTGTAAGT 240
GTAGAAGGTA CATGGGGGAC GTATCCAGGA ATTCGGGGAA GAAGGGTGGG TAATGTCAGT 300
ACTTTAGATA CTTGAGCTGA GTCCTTAAAG AGGATTAAAT GTTCACCTGG GCAACCTTGG 360
GGGAAGGGCT CTTAGCATAA AGATCACCTG GAGCAAAGAC AAAACTATCA ACAGCCTGGT 420
TTGGTTAAAA TAGAGGCTTT TGCCAGGCTA TCGTAAAGAT GGGACTTGAC TAACATGAGG 480
GGGTCAGAAA ATCAGCTCAT ATGATCAATT TTTTGCCACG TGATGAGAAA CTGGTTTACA 540
CAGGATTGAG AAAACACTAC ACTAGATAAT GATGTCACCA CATAAAATCA AAGGAGACTG 600
CACAGTTAGA AAACTAAACT CTCTTCAGGA AAATATTAAA GAACTGTATT AAAGCCCACC 660
TGAGAAGTTT ACTCAATGTA TCATTTAGAA AGACCCATTC AGGAGTCTTT GATAAAGAGG 720
ACTTTAAGTA ACAGATGGCA TTTCCCAAGT CAGGTTGAAA GGTCTCTCAA GTTCAAGATA 780
ATCAAATTTT AATTAAGCCA ACTTATTTAA AAGATGTGTC ACAGGGGTGG AGCTTAAAAT 840
TACCACATAT GTATATATAA ACAAGTAACT CTTTATGAAG CTGAGGCCAA AATCGCCACT 900
TGGAATTCTA CCTCCCAAGT AGATGGTAAA AAAGACATTC TACCAGAGCC AATTAACAAA 960
AGAGTGGGGA GGATCATAAA CGAAAACACA AATATAAGGG GGGAGGGGGT GACAAGCTAC 1020
GCAAAACCCG TAATCCTCTT GGCAGTCTGA TGAGGAAATC ACACAACTCA GACATAAAGG 1080
CAGGAAAACC ATGTCATCCT CAACTCCACA AGCTAAACTA CTAGGCACCG AAGGGGATAA 1140
GATCACACAC TCGATTCCTG AACTCAAGGA CAGAAGACCG TCCTCAACCC GTGCCCAAGG 1200
GGATGCCCAG AAGGACCCTT TTCCATTTGG GAACCGGGCA GCAGACACCC TCAAGGCCAG 1260
CCCTGAAGGG GTCAACGCCA CCCCCCCCCC ACCCACCCCC GGTCTAGGCC GTGGAGGCCA 1320
AGGGCAGAGG GCCCGAGCCG CCTCCTCTCG CACGCCGACA CACACCCTCC 1370