EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM028-21078

Organism

Mus musculus

Tissue/cell

Cerebellum

Coordinate

chr4:41513880-41516200

Target genes

Number: 22
Name	Ensembl ID

n	ENSMUSG00000065873
Dcaf12	ENSMUSG00000028436
Kif24	ENSMUSG00000028438
Nudt2	ENSMUSG00000028443
AI464131	ENSMUSG00000046312
1110017D15Rik	ENSMUSG00000028441
1700066J24Rik	ENSMUSG00000036162
Gm12404	ENSMUSG00000087623
2310028H24Rik	ENSMUSG00000028439
Dnaic1	ENSMUSG00000061322
Gm12406	ENSMUSG00000084761
Enho	ENSMUSG00000028445
Gm12405	ENSMUSG00000087054
Cntfr	ENSMUSG00000028444
Il11ra1	ENSMUSG00000073889
2810432D09Rik	ENSMUSG00000036114
Dctn3	ENSMUSG00000028447
Galt	ENSMUSG00000036073
Sigmar1	ENSMUSG00000036078
Ccl27a	ENSMUSG00000073888
Gm13308	ENSMUSG00000078747
Gm13307	ENSMUSG00000085730

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

JUN	MA0488.1	chr4:41515410-41515423	ATGACATCATTCC	-	6.34
JUND(var.2)	MA0492.1	chr4:41515409-41515424	GATGACATCATTCCT	-	6.91
RELA	MA0107.1	chr4:41515671-41515681	GGAAATTCCC	-	6.02
SP8	MA0747.1	chr4:41514210-41514222	AGTGGGCGTGTC	-	6.37

Enhancer Sequence

TCAATGCTCT GAGTCAATAT ATCAGGCTTC ATGCTATTCT TTGGAAGGGA GAATTGGGAA 60
CTATAGTTTA AATGGTGAAT GAATAGAGAC TTCCTAGAGG TCTCCATAAA TAATAGCAAG 120
AAGTAGAAGA GATCGCAGGT GAATCTGAGC CTGAGTCCCT AGTTTTGATG GTCTTTCCCC 180
AAACACGCCT ACAGAGCCAT TCTGCCTTCT ACCTCTGTGG TGTGCATCTT GATTCCTTAT 240
GACCCGCATG AATGCCCTTG TGGAAATGCT ACACTAGATT CATCCTGTTC TCAACAGAAT 300
AAAGAACACT TAAGGAGTTT GGGGTTGGGG AGTGGGCGTG TCTCTAGACT CCAATATGGG 360
AACAGAGTCA AGAAACAGCG TACTGTCTTT GACCCCCCAA GTGTGAGAGA CTATATTGTT 420
ATTTCTTTAA GATTTCTTTA AGATTCCCTC GGCCTTGGCA CAGCATTCTC TTGCAGATTG 480
CTTTAGCCTT CAGAAAGGGG CAGTTACAGC TATTCTAATA AGCATCTTCT CACCACAAAC 540
GTCTCTAAAC AGCCCCAGAG TCTTCTACCC AGGGTTAAGA AAGAATACCA GAAAATAACA 600
GAACCAAAAA CAACTGCACA ATCCTGATGG CTTGATTCTT TCTTCTCTGC CCTTGGATAG 660
CTATTATCTT GGAATCCTCA GATAAGAAAC AAGAACTACC TCCTCTCCTA GACTTACTAG 720
GACCTCCACC CCTTTCATCC ACCCACCCAC ACAGGATCAG CTTAGAACTG GAAGGGCATC 780
CTAGTTTGAA AACAAGGTTA GCTGGGTAGG GAGCCTACTA AGTTCTAACT CAGCCCAAGG 840
GCCTTCTTTA CATCCACAGA ACCAACTGTT CCCTGGAGAT TTTCCGGTTC CCAAAGAATC 900
CGGCAGTGAC ATCAAGGTAG GGAAAAGTCC TGCAGCATCT CTCAGTTTAA CACTGTACAA 960
AGCCCATCTG TTTCAGCGTC ACAAACCGTA GAAGACACTT GTCTCCAGCT GCACGGCAAT 1020
TGATTATCCA GCAAACGGAG ATTGTCATAC TTCCCACTGT GGTTCACCTT GGCTACTGTA 1080
ACAGGCGGGT TCCTTACCTA GGAAACCACA AAGCCTACCT GTCAGTTTGG GAGCCGAAGG 1140
CCCAAGGGAA GAAGCTATTC TGGGCCACCC TGACTAACAC AGAGGGAAGA GACGTGGGGA 1200
GCCCTCAAGC TTCAGGAGTT GGAGAGCACA GGTTGGCTCC AGCAGAGAGC AAGGCATCCA 1260
TTACCTATTG GTTCCTGGCC TATCACGCCT CGTTTTAGAT CTTACTAGCA CAGGCCCCAA 1320
GGTGGGTTAA GCAATGAACA TGGCCTCTAC ATTCTTTCCT CTCTATTCTC TAGGCCAGCT 1380
GGCTAGGCCT CTGACTTTCC TACCCATATG CTGACAGCAA TGACAGTCAG GTAGCCTCAG 1440
GGCAATGGCC AGGAGGCACC TTCTTCTTTA GGCCATGCCT CCATAAACTG GCATCGCCCT 1500
CCCCCTTCCA TCCCCTCGGC GCCGGCATCG ATGACATCAT TCCTGCCTGA CTCCAGGACC 1560
ACGGACCGGA GGCAGGATCC CCGCCCAGCA AAGACTCCAA ACACGTAGGC CTAAGATGAT 1620
AGGGGCTCTT CCGAATTCCG AACCGGTCGG CACGGCCCAC TTCAGCACAG CTCCACCTCT 1680
TATCCTGGAG ATACCTTCCC ATGGACACCC TTGAGTCTCC ATCTCGCCAC CGCAAACTCT 1740
TCCCCTTCCC GATGCCCCCA GATCGAAATG GGGCTCCTCT CTCGAGAGGA AGGAAATTCC 1800
CAGGTTCTGC AATGAACCTC TGCCCCCATC AAGGCCTGGT TCCTGCTCAG CTTTGCTATA 1860
TTTATCTAAA GGACCGGCGG GCAGGCCTCT CCTTTTCTAA AGGCCTATTT CCTTTCCTCC 1920
TTAGACTGAT CTGCTGGCCT CCTCCCTCGC CCTGAGCATC ACAGGCCTCG GGGAGCTAAA 1980
CGCCTTTCTC ATCCGACCCC CCGGGCTTGC TGCCAAAGAT GCTCTGTGAC ATCCTCCTAA 2040
ATTGCCCTCC ACTAGAGGTG TGCACTAGAG TGCCTCCCTT GGTCCTATCC GACGGCGTTC 2100
TGCATCTGCT GACCGTGCCC TCCGCCCTTT CAGGTCCTTC GCTCGCACCG CTGGTAATCT 2160
CCCACGGTTT TCTCGCTCTG CAAATCTCCC TCCCCCGGCA AAGCGTTTTC AGGACTCCCT 2220
CTACCTTATC AGATGGCGCC CCCTCGCACA ATCCCCACGG CCTAGTTCCT TCCCTCCCCT 2280
CCAGCGGCGC CCCTCCCGGC CCTGGCCTCT CCGCCGCCCG 2320