EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM028-21072

Organism

Mus musculus

Tissue/cell

Cerebellum

Coordinate

chr4:41411030-41411740

Target genes

Number: 17
Name	Ensembl ID

Gm12401	ENSMUSG00000081866
n	ENSMUSG00000065873
Dcaf12	ENSMUSG00000028436
Ubap1	ENSMUSG00000028437
Nudt2	ENSMUSG00000028443
AI464131	ENSMUSG00000046312
Gm12404	ENSMUSG00000087623
2310028H24Rik	ENSMUSG00000028439
Dnaic1	ENSMUSG00000061322
Gm12406	ENSMUSG00000084761
Enho	ENSMUSG00000028445
Gm12405	ENSMUSG00000087054
Cntfr	ENSMUSG00000028444
Il11ra1	ENSMUSG00000073889
2810432D09Rik	ENSMUSG00000036114
Dctn3	ENSMUSG00000028447
Sigmar1	ENSMUSG00000036078

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3	MA0041.1	chr4:41411341-41411353	AAACAAACAAAC	-	6.32
NRF1	MA0506.1	chr4:41411695-41411706	CGCGCAGGCGC	-	6.14

Enhancer Sequence

AAAACTTAAA AAAAGAAAAG CAGTAAATAA TGAAGTAATG TATGTATGCT AGCGGTCAGC 60
TTGCTTTCTC CACTCTATTA CTGCTCAGAA TTCCCTGCCT TGGGAATGTT GCCACCCACA 120
CTGAGCAGGT CTTCCTGCCC CCAACGTGGG AACGCCAACG CTGAATTTTC TGTCTCTTGT 180
ATATGAGATT AGGGTGTCCT CTCTCTTCCA CCTGCCCCCA AATCGACTTT GAATGGGACA 240
AGGCAGAAAG ATAACTGAAT CTATTTGTAG TGAGTGAAAG CCAACTGAAC AAATATTTCC 300
TTAAAAAAAC AAAACAAACA AACAAAAAAC TAATATGCGT AAGACGCTGT GGAAAGGCTT 360
GTCTTATCTC AGAGGTCAAA ATTATATGAG AAAAAAGGAG AATGAGGTTT GCGGAAGTTC 420
ACAAAACAAC CGAAAGTCCA ATCGAAGCGC TCTGAAGAGC GTGTCTCAAA GGCAAGAGGC 480
CTTTGGGGTA CTCAGAAAAG CCTCAAAGCT GGTGGTGGTC GAGGTAATTG CTGAAGAGGC 540
GGTAGACAGG GAGATGAAAC GTGAGAGAGC GCGAGAACCC TCGAAGAACC CGAGAAGCCA 600
AGTTCTAGTT ACCCCGCAAA TACCGGTCTC GGCTCGCGCC GCTCGCAGAC AGGAGCACCC 660
GCTCCCGCGC AGGCGCAGAG CCTGGGCTCA AGCTAAAGCC ACCGTTTCTC 710