EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM028-20034

Organism

Mus musculus

Tissue/cell

Cerebellum

Coordinate

chr3:88048560-88049050

Target genes

Number: 25
Name	Ensembl ID

Hdgf	ENSMUSG00000004897
Mrpl24	ENSMUSG00000019710
Nes	ENSMUSG00000004891
Bcan	ENSMUSG00000004892
Hapln2	ENSMUSG00000004894
Gpatch4	ENSMUSG00000028069
Apoa1bp	ENSMUSG00000028070
Mef2d	ENSMUSG00000001419
1700113A16Rik	ENSMUSG00000086082
AW047730	ENSMUSG00000091886
Gm3764	ENSMUSG00000091070
AC044864.1	ENSMUSG00000092876
1700021C14Rik	ENSMUSG00000010538
Cct3	ENSMUSG00000001416
Tmem79	ENSMUSG00000001420
Paqr6	ENSMUSG00000041423
Pmf1	ENSMUSG00000028066
Sema4a	ENSMUSG00000028064
Lmna	ENSMUSG00000028063
Mex3a	ENSMUSG00000074480
Lamtor2	ENSMUSG00000028062
Ubqln4	ENSMUSG00000008604
Ssr2	ENSMUSG00000041355
Syt11	ENSMUSG00000068923
U6	ENSMUSG00000065786

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

FOXA1	MA0148.4	chr3:88048868-88048884	AATTGTTTACTTTATG	-	6.48
FOXD2	MA0847.2	chr3:88048870-88048883	TTGTTTACTTTAT	-	6.3
Foxj3	MA0851.1	chr3:88048866-88048883	GAAATTGTTTACTTTAT	-	6.33

Enhancer Sequence

TCTGCAGGCT GAAGGGAGAC CAGACAGGGA ATGATGGATG TGAAACAGGC AGCCAGGGTG 60
TCCTGTGTCA CTCGTGCCTG TGGGCAGCCA GAGGGTGTGC AGGGATCCCC AGCGTCTCTC 120
ACCCAGGCCT TTGCTCAGTC AGGTTCACTT CAAGTGCTCT CCTGTCCTAA GCCAGCCACC 180
TCCACATACC TGTCAGAACC CAGTCAAAGG TCTCTTTTGC CTGCCCTACT CCTGGCTCAC 240
AGTGTGAGAT GTAGACCCCA GAGGTCATTA CCTCTTGCTG GTCCTGAAGG AATGCTCAGT 300
GCTCTTGAAA TTGTTTACTT TATGGCCATC CATGGCCCTG ACCAGGAGGT CAGGCCACAG 360
CAGGCCCTCG GTTCTCACCA TACTGGTAGG TGAATGGCCA AATGGGTGGA TGGGAACAGG 420
TGGAGAGGCT CTTTTTCCCC TTGGCTCTCG AGGAAGAAGA GAGGTCACTT TGGAGAGAAT 480
GAGGGAGGAC 490