EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM028-20007

Organism

Mus musculus

Tissue/cell

Cerebellum

Coordinate

chr3:87801270-87801660

Target genes

Number: 19
Name	Ensembl ID

4933430H15Rik	ENSMUSG00000023084
Insrr	ENSMUSG00000005640
Pear1	ENSMUSG00000028073
Prcc	ENSMUSG00000004895
Hdgf	ENSMUSG00000004897
Mrpl24	ENSMUSG00000019710
Isg20l2	ENSMUSG00000048039
Rrnad1	ENSMUSG00000004896
Crabp2	ENSMUSG00000004885
Nes	ENSMUSG00000004891
Bcan	ENSMUSG00000004892
Hapln2	ENSMUSG00000004894
Gpatch4	ENSMUSG00000028069
Apoa1bp	ENSMUSG00000028070
Mef2d	ENSMUSG00000001419
1700113A16Rik	ENSMUSG00000086082
AW047730	ENSMUSG00000091886
AC044864.1	ENSMUSG00000092876
Cct3	ENSMUSG00000001416

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF5	MA0599.1	chr3:87801347-87801357	GCCCCGCCCC	+	6.02
REST	MA0138.2	chr3:87801401-87801422	AGCACTGCCCAGGGTCCTGAA	-	7.08
SP1	MA0079.4	chr3:87801344-87801359	CAAGCCCCGCCCCTC	+	6.34
SP2	MA0516.2	chr3:87801343-87801360	CCAAGCCCCGCCCCTCG	+	6.39

Enhancer Sequence

TCGATCCTCT GTGGACAGGG GTCAAAGCCG GCTGCAGCCA GACGCAGGAC GTAGTGCGCC 60
TGTGCGCTTG GCTCCAAGCC CCGCCCCTCG ATCCAAGGCG CCTGGGGTGC ACTGCCCAGC 120
TCAGGGTGCT GAGCACTGCC CAGGGTCCTG AATTTGATCC TCTACCCTTA GCCTCCTGCC 180
TCGTGCTCCT TTGCAACTCT GACCCCCAAG ACTCCCCTAC TTACTAGGGT TCCCAATTCA 240
TCCCTATTTT GCAGTTGGCT CCAGCCCTTG CCCACAGCAC TTCCACATCT CCTTCCGTGT 300
GCCTAGGCTG GAAGCATGTA GCTGGGGCTA AACCGAGACA GCCCTCTGTC CTGAGAAAGA 360
TGCAGCAGAG ACATGGTCCT CTGGATGCTT 390