EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM028-19514

Organism

Mus musculus

Tissue/cell

Cerebellum

Coordinate

chr2:181020990-181022580

Target genes

Number: 26
Name	Ensembl ID

Ythdf1	ENSMUSG00000038848
Arfgap1	ENSMUSG00000027575
9230112E08Rik	ENSMUSG00000070461
Col20a1	ENSMUSG00000016356
Chrna4	ENSMUSG00000027577
Kcnq2	ENSMUSG00000016346
Eef1a2	ENSMUSG00000016349
Ppdpf	ENSMUSG00000016344
BC006779	ENSMUSG00000027580
Gm14447	ENSMUSG00000084033
Stmn3	ENSMUSG00000027581
Rtel1	ENSMUSG00000038685
Zgpat	ENSMUSG00000027582
Arfrp1	ENSMUSG00000038671
Lime1	ENSMUSG00000090077
Slc2a4rg	ENSMUSG00000085028
Zbtb46	ENSMUSG00000027583
Tpd52l2	ENSMUSG00000000827
U1	ENSMUSG00000088378
Dnajc5	ENSMUSG00000000826
Uckl1	ENSMUSG00000089917
Prpf6	ENSMUSG00000002455
Znf512b	ENSMUSG00000000823
Samd10	ENSMUSG00000038605
Rgs19	ENSMUSG00000002458
Oprl1	ENSMUSG00000027584

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EWSR1-FLI1	MA0149.1	chr2:181021522-181021540	GGAAGGCAGGGAGGAGGG	+	7.07
STAT3	MA0144.2	chr2:181021773-181021784	CTTCCCAGAAA	-	6.02
ZNF263	MA0528.1	chr2:181022460-181022481	TCCCCCGGCCTCCCCTCCCCC	-	6.47

Enhancer Sequence

TTGGTTCTGG GCGGAACCTG GGTCTCTGGA GGATCCCTAA GGGCCAAAGG AAAGTAAAGG 60
TTGACTTCCA GGCTACTAAT CATCAATAAC ATCCAATCCC TGTACTACCC TGACCCAAAG 120
ACCCAAGAAA CCAAGAAATA TAAGCTGACT AAAACCAAGG ATGATCGCAT GGAAACCTTC 180
ACAAAGAAAA AGAAGCAAGA AGAAACTAGG GGCCATTTTC CAAAATAATC ACAAGCTATT 240
AAGAATGAGT CCTACCCAGA GGCAGGTAGA TTTCTCATCA TCTACAGCCT CATCTACAAA 300
GTGAGTTCCA GGACAGCCAG GGCTATACAG AGAAACCCTG TCTCTAAATA AATAAATAAA 360
TAAAGTCCTA GGTTAGTTCC AGGTCAGTCT TAAATATTTT TTCCCCTCTC TCCTTTTGTC 420
ATTCTGTATG TCTTGGAACT CATTCTGTAG ACCAGGCTGA CCTTCAACAA CATCTGCATC 480
TGTTTCCCAC ATGCTCGGAT TATGGCCTCA GTCTAGATAC TAAGACTGTC TAGGAAGGCA 540
GGGAGGAGGG AAGATGAAAT GTAGGGACTA GTAAACCTTA CCATAAGGCA GGCCCATTCC 600
ATGAGTTGGT CTCCTGGCAC AGAAGGGACA CCTAAATATC TTTTCAGGTA GGTCACAAAG 660
TGGGTTAATC TATGGCCTAG GTTTGTTTTT CTCAGTCACA TACGCACATA CACTGACATG 720
TTTGTTCTTG GCACTCTCCA TTTTATATCC AAATGGTATG TATGTATGTG TACTCCAGGA 780
TGTCTTCCCA GAAAGCTTTC CATATTTCCT ATGAAGAAAC AAACTAGACA GGTAGTCATA 840
TTATCGATTT AATTTTAACT TATTAAGAAT GATAATTTGA AACTGTTGGG TTTGAAATGT 900
TTTCAAGACA GAGAACATTG GCTCAGCAGT GAAGTAACCA ACTAAATACC TAAAAATGTC 960
ACCAATCGTG ACTAAAACTG GGCCAACCGA TTCGGTTCCC AGCAATAAGA TTATCCACTC 1020
AAAATAATTC CCTCCAACCA CACAGTTCTA CAAATGGGTC CCCATCAACG TGGTTCCCAT 1080
CTGACAGGTC CACCCTGACA TGGTTCCACT GATATCAAGT ACCTATCCTG ATGATCCTGG 1140
CCTCTAGATT CAGTTCCAAG CCAGGGGTTC AGCAATACGG GTCCCACCCA TGAGTCGTTC 1200
CCAATCTTTC CACCCGCCCT CAGGAACCCG ACCCATCTGG TGCCCACCGA TGGGTCCCAA 1260
ACACCACCAC TCCCGCCTAA CCGCTCCCCA CTCCTCCAGC CCCTTCCGCC TCGGCTTTCA 1320
CGGACGACCC GACCCTGCCT CTGGCGAGGC CAAGATGGAG GCCGGAAGCG AGCCGCCTTC 1380
GCGAGCCCTC CCGCCAGGCG CCCGCGCCCG CCCGCCAGCC TGACGCCGCC GCGCCTGACG 1440
CCGCCGCCGC CCTCGCGCGC CCGCCGCCCC TCCCCCGGCC TCCCCTCCCC CCGCCGTAAC 1500
GTCCTGACGC TCCGCAGGGA CCCCTGACTG GACGGCGGCG CGTGAGCGGC GCGAGAAGCC 1560
TCGCCGCGGG GGTGCGCGGG CGCGCCGATG 1590