EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM028-17921

Organism

Mus musculus

Tissue/cell

Cerebellum

Coordinate

chr2:90978550-90978860

Target genes

Number: 21
Name	Ensembl ID

Mtch2	ENSMUSG00000027282
C1qtnf4	ENSMUSG00000040794
Kbtbd4	ENSMUSG00000005505
Ndufs3	ENSMUSG00000005510
Gm17661	ENSMUSG00000091037
Ptpmt1	ENSMUSG00000063235
Celf1	ENSMUSG00000005506
Gm13778	ENSMUSG00000086495
Psmc3	ENSMUSG00000002102
Slc39a13	ENSMUSG00000002105
Sfpi1	ENSMUSG00000002111
Mybpc3	ENSMUSG00000002100
Madd	ENSMUSG00000040687
Nr1h3	ENSMUSG00000002108
Acp2	ENSMUSG00000002103
A330069E16Rik	ENSMUSG00000073749
Pacsin3	ENSMUSG00000027257
Gm17281	ENSMUSG00000091637
Gm13787	ENSMUSG00000081248
Lrp4	ENSMUSG00000027253
Ckap5	ENSMUSG00000040549

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

TFAP2A	MA0003.3	chr2:90978673-90978684	AGCCTCAGGCA	+	6.32
TFAP2B(var.2)	MA0812.1	chr2:90978673-90978684	AGCCTCAGGCA	+	6.62
TFAP2C(var.2)	MA0814.1	chr2:90978673-90978684	AGCCTCAGGCA	+	6.62

Enhancer Sequence

TCGTGGGCCT GCAGGGAACA GAAGACCCGT TGGATCAGCC ACACTGAGAC TCCTTCTTAG 60
GTAGAGGGTC AGCCTAGAGT ACGAGGCCTG CCCTGACACT AGTGCAGGCC CCTGGGCTGA 120
GTGAGCCTCA GGCAAGTCTC TGGAAGCCTT TCTCCTGAGA GAGGGGGGTC AGCACATGTA 180
CCCCAGATGA AAGGTGTGTT TGACTTGAGT TGAACCCCTG GCATCTAGTC CCCCGCGAGG 240
GTCCACCCTT CTTGCCGGAA GGTTCCCAGG GAGCCCTGCG TGCTTCGGCC TGCTGTGGCT 300
GGGACGCATA 310