EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM028-17898

Organism

Mus musculus

Tissue/cell

Cerebellum

Coordinate

chr2:90908010-90908580

Target genes

Number: 20
Name	Ensembl ID

Nup160	ENSMUSG00000051329
Fnbp4	ENSMUSG00000008200
Agbl2	ENSMUSG00000040812
Mtch2	ENSMUSG00000027282
C1qtnf4	ENSMUSG00000040794
Ndufs3	ENSMUSG00000005510
Gm17661	ENSMUSG00000091037
Gm13777	ENSMUSG00000082108
Rapsn	ENSMUSG00000002104
Gm13778	ENSMUSG00000086495
Psmc3	ENSMUSG00000002102
Slc39a13	ENSMUSG00000002105
Sfpi1	ENSMUSG00000002111
Madd	ENSMUSG00000040687
Nr1h3	ENSMUSG00000002108
A330069E16Rik	ENSMUSG00000073749
Pacsin3	ENSMUSG00000027257
Gm17281	ENSMUSG00000091637
Gm13787	ENSMUSG00000081248
Ckap5	ENSMUSG00000040549

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3	MA0041.1	chr2:90908053-90908065	GTTTGTTTGTTT	+	6.32
Foxd3	MA0041.1	chr2:90908057-90908069	GTTTGTTTGTTT	+	6.32
Nr5a2	MA0505.1	chr2:90908147-90908162	GCTGTCCTTGAACTC	-	7.06

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_09986

chr2:90908329-90911752

MEF

Enhancer Sequence

TTCTACTACT AAATGACATG CTCAGCCTTA TTATCCCTAC TTTGTTTGTT TGTTTGTTTT 60
TGTTTTTGTT TTTGTTTTTT CGAGACAGGG TTTCTCTGTA TAGTCCTGGC TGTCCTGGAA 120
CTCACTCTGT AGATCAGGCT GTCCTTGAAC TCAGAAATCT GCCTGCCTCT GCCTCCCAAG 180
TGCTGGGATT AAAGGCGTGT GCCACCACTG CCCGGCCTTA TTATCCCCAT TTTAAAGTCT 240
GACAGACTGA GGCAGAGTGA GGTTAAGTAA ATTGCCATGT TCTACATAGT TGGTGGGTGG 300
CAGAGCCATG ATTTGAGCCC AGGTAGTATG GCAGCCATAT TGCCAGCCAT TCTTCATAAC 360
GAGTCTGGGG AATGTTTGTT GATTGAAATA ATAAACAGAT GCATGCATGA GTGAACAAAT 420
GAATATGTAT ACCCTATGCG CACAGGACCA AGGTGACACT GGACTCCATG CTAGGCATAC 480
TATGTCTGGT GTACCTGGTA CATGAGACCT GGCATTTCCC CAGAGCCGGC AGCAGGTTCC 540
CTCCCCTCTG ATCCTCAGCT GCTGAAGGGC 570