EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM028-17356

Organism

Mus musculus

Tissue/cell

Cerebellum

Coordinate

chr2:32670540-32672800

Target genes

Number: 30
Name	Ensembl ID

Prrc2b	ENSMUSG00000039262
Swi5	ENSMUSG00000044627
Mir199b	ENSMUSG00000092807
Dnm1	ENSMUSG00000026825
1110008P14Rik	ENSMUSG00000039195
Dpm2	ENSMUSG00000026810
Pip5kl1	ENSMUSG00000046854
9430097D07Rik	ENSMUSG00000075405
St6galnac4	ENSMUSG00000079442
St6galnac6	ENSMUSG00000026811
Ak1	ENSMUSG00000026817
Eng	ENSMUSG00000026814
Fpgs	ENSMUSG00000009566
Cdk9	ENSMUSG00000009555
Sh2d3c	ENSMUSG00000059013
6330409D20Rik	ENSMUSG00000009551
Tor2a	ENSMUSG00000009563
Ttc16	ENSMUSG00000039021
Ptrh1	ENSMUSG00000053746
1700019L03Rik	ENSMUSG00000038987
SNORA31	ENSMUSG00000064652
Gm13524	ENSMUSG00000085397
Stxbp1	ENSMUSG00000026797
Gm13523	ENSMUSG00000087496
Fam129b	ENSMUSG00000026796
Rpl12	ENSMUSG00000038900
Lrsam1	ENSMUSG00000026792
Snora65	ENSMUSG00000065124
Slc2a8	ENSMUSG00000026791
Garnl3	ENSMUSG00000038860

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

FOXD2	MA0847.2	chr2:32672771-32672784	CTTAAATAAACAT	+	6.14
ZNF263	MA0528.1	chr2:32671233-32671254	CTCTCCTCCTCCTCCTCCTCC	-	10.75
ZNF263	MA0528.1	chr2:32671236-32671257	TCCTCCTCCTCCTCCTCCCAC	-	6.35
ZNF263	MA0528.1	chr2:32671932-32671953	TTCTCTTTCCTCTCCTCCCCA	-	6.45
ZNF263	MA0528.1	chr2:32671230-32671251	GTACTCTCCTCCTCCTCCTCC	-	6.54
ZNF263	MA0528.1	chr2:32671929-32671950	TTTTTCTCTTTCCTCTCCTCC	-	6.5

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_03737	chr2:32670251-32671515	Cerebellum
mSE_03737	chr2:32671556-32674336	Cerebellum

Enhancer Sequence

AATACACCTG GAGCGACAGA GCAGGCAGGG GTGTAAGTCC TATCAGTGAG CAGCTGGAAT 60
GTCCGTCTGT CTGTCCATCC AGCTATCCGT CTATCCATCC ATCCGTCCAT CTGCCACCCT 120
GGTGGCCTGC TCATGCTTTT GTTTATTCCA GTGCCAAGCA CTTCAACTGT TAGTGACCAA 180
AACATCTCTG CTCCCAAGGA GTCTGTCACA TAGCAGGGGA CGACAGACAT TAAACACTCT 240
GAAATAAACT ATATGGGGTT GAAAACTGTA AACAGCTGAG GAAAGAGTAA AGCAGGCAAA 300
GAATGCCCCA GATGGCTCTG TGTGTGTTCG CACGTGTGCA CGTGTGTATG CATACATGGG 360
TGTGCATACG TGGGTGTGCG TGCATGTGCA TGTGTATGCC TGGACTCACA GGGGAGGGAG 420
GTCTGAGAAG GGTCTCAAGG AGGTGAGGTG TTTGCTGCCA GCAGAAGGCT CGAGAAGGGA 480
AGGGTGAAGC CCAAGATCTT ACTTAGGGTG TGGTGTGTGC ACCTAGCGTG TCCTGTGAGC 540
GATGCTGGAG AGCAGTGCAA GTGTTCATAG GCCAGTCTGA GTTTGCTTTC AATAAACAAC 600
GCATGATCTG GAGATTGTGC CACAACTGTG GGCAAATAAG GGAGCTTTTT ATAGGTTTAA 660
TGATATCCTG TCTCCAGCAA ACTGCTCTAA GTACTCTCCT CCTCCTCCTC CTCCCACCCC 720
TTTCTGTAAA GGGCTGTGGA AGTTCGACTC TCTCTTTAAG ATGAAGCCAA CCAACTCTCA 780
GGATTCTCTC AAGTTCTCAC TTGTTAAACT ACCTGCACCT CCCTGTGAAA GTGGTGGTGG 840
TGATGATGGA GACAAGGCCT TACTCTGTCC TTCAGGCTGA CCTGAAACTC ACAACTTAGC 900
CCAGGCTCGT ATTAGATTTG AGGTACTTCT CTGACCTCAG AATCCTAAGT GCTGGGTTAC 960
AGGGTTGAGA ACAAGTTCAA CTTAAAACGT GATTTGTATG TATGTATGTA TGTATGTATG 1020
TATGTATGTA TGTATTATTT ATTTAGTTTT ATTTTTGAGA CAGGGTTTCT CTACACATCC 1080
CTGGCTGGCC TAGAACTCAC TCTGTAGACC AGGCTGGCCT CAAACTCACA GAGATCTGCC 1140
TGCCTCTGTC TCCCAAGTGC TGGGACAAAA GGTGTGCCTG GTAAAAACTG ATTTTTAAAC 1200
TTCCTACTTT CTCATGCTTT CTGAAAAATA ATGCTTTTAT GTGCTAACCC TGGACTGCGT 1260
TTACTTAGGC GATGCTGGGG TATAGAGAAG CAGGTAAGCA TATTCGGCTC TCCAGGGGGA 1320
GACAGGTTTC AGGGCAAGCA AAAAGGCACT GAGCCAGCTC TGATGTTCAC ATTGTACCTG 1380
TCCCCTCTCT TTTTCTCTTT CCTCTCCTCC CCACCCTATT TCCCTTTTCT TTTCTTTCTT 1440
TTCTTTCTTT TCTTTTCTTT TCTTTTTTTT TTTTTTTTTT TTTTTTTTTT TTTGGACAGG 1500
GTGTCATATA GCCCAGCTTC ACCTCTAACT TGTTATAACT GAGGACAGCC TTGAACTCCT 1560
GATCCTCCTG CCTCTACGCA CCTTCCAAGT GCTAGGAATA CAGGCTTGCC ACCACACTCA 1620
GTTTATAAAG CCCAACTGCA GCTGGCTTTG CGCCTTCTAG AGAAGCACTC TACCACCCAA 1680
GCTCCATCCA GCCCCTGCCT AACAATAGGC TACCCCACAG TGTTAGGAGC TCATCTATAA 1740
AGATCCATAT ATATCTTTCA ATACCACAGA ACACATACAA ATCCTATGGT TTTTGGTTCC 1800
TTCTGCCAAG AGAAAACATT TGGATAAGCT CTAACATACT CAAATAAATT TCATATATTC 1860
TCTCAATCAG CTTTACCTTT GTGGAGATAA AAGCTTTATA TTTTTTTCCA CGGGGAGTTG 1920
CTGTTGGAAC CTCCGGGTAA GGGTGGATGA AGTGCTAACA GCTTATGATG GAGGTGACCA 1980
TCTGCTCTCA GCACATGACA AGCTGGGGTA ACTGCCAATA AAAACAGCCT CCTATGCAGC 2040
AGATGGGTGC TCTAGAGTCT GCCCTTCCTC CTCGTCCCCT TTTAGGAACA AGCTACTTTG 2100
GTTATTCAAG GAGTCAGTGA AGAGGAGTGG GCAGTGCTCG GTGGTGCTTG GGCAGCACGG 2160
AGACCACTGC AGTCAGTAAG GGCGGGTGAA GGGATGACAT CATCGGGCAG ACACCATGGC 2220
AGCCCATTTC CCTTAAATAA ACATCCGCAC AGAAACAGAC 2260