EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM028-15918

Organism

Mus musculus

Tissue/cell

Cerebellum

Coordinate

chr19:7007450-7008830

Target genes

Number: 24
Name	Ensembl ID

Ehd1	ENSMUSG00000024772
Map4k2	ENSMUSG00000024948
Nrxn2	ENSMUSG00000033768
Rps6ka4	ENSMUSG00000024952
Ccdc88b	ENSMUSG00000047810
Trmt112	ENSMUSG00000038812
Prdx5	ENSMUSG00000024953
Esrra	ENSMUSG00000024955
1700019N12Rik	ENSMUSG00000050623
Bad	ENSMUSG00000024959
Gpr137	ENSMUSG00000024958
Plcb3	ENSMUSG00000024960
Ppp1r14b	ENSMUSG00000056612
Dnajc4	ENSMUSG00000024963
Nudt22	ENSMUSG00000037349
Trpt1	ENSMUSG00000047656
Fermt3	ENSMUSG00000024965
Stip1	ENSMUSG00000024966
Macrod1	ENSMUSG00000036278
Otub1	ENSMUSG00000024767
Cox8a	ENSMUSG00000035885
Naa40	ENSMUSG00000024764
AI846148	ENSMUSG00000024970
Rtn3	ENSMUSG00000024758

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

BCL6	MA0463.2	chr19:7007951-7007967	GGGCTTTCGAGGAACC	+	6.73
KLF4	MA0039.3	chr19:7007505-7007516	CCACACCCTCC	+	6.32
TEAD1	MA0090.2	chr19:7008186-7008196	CACATTCCAT	+	6.02
TEAD4	MA0809.1	chr19:7008186-7008196	CACATTCCAT	+	6.02
TGIF1	MA0796.1	chr19:7008092-7008104	GGACAGCTGTCA	-	6.11

Enhancer Sequence

AGTGGTCACT GCAGGCCAAA CCAAGGATTA TGGGGTCACG AAGAGATCCA TACATCCACA 60
CCCTCCTTCT CTAGATTAGA CTCCCCAAAG TTTTTGAGCC CCTAGCTTTA TTATCCATAG 120
ATGTAACCCC CACACAGCCT CTGGTTCCAG GTACTAACAC CTAGGCCCCC ACCTCCAGCC 180
TCCCTCTTAC CTCCGGAGCC TAGCCATCAG GAGAGTGGGA TAAAGAAGAA AACACTAAGC 240
CAGGCAGGGT GAGTGAGAAA ATGGGGGACT TGTGAGGCAT TAGGGTGCCT GCCTTGGAGA 300
AGACCAAAGG AAGACTAGGG AGTTCCAGGG GAAATAGGAA GAGGCTGGAG CCTGCAGAAC 360
TGGAGACAGG AATAGCAGGT CCATACTTGG CTCTCTCAGT GCGGCTGTGG CAGCCTCCTC 420
AGATGCATCT GTCCCCTCCT GCCTTCCAGC CTAGCAGGGA TCAACCGGGC GGGGATCTTC 480
CAGGGTCCCC ACCCGCCCGC TGGGCTTTCG AGGAACCCCA AGGCGGATCT GGCTGCAGGG 540
TATAGGCAAG GCCCAGAGCC AGGGAAAGGA AAAGTGGGCA CAAAGTTCCC AGAAGAAGCA 600
AGGCACAGGG TGGGAAGGGC AGCACGGATA CAGCAGCCCA CGGGACAGCT GTCACTTAGG 660
GGGCAGCGGG AGATGGCAGG CACACACACA CATACATATA CACAGTCTGC TACATGTGCC 720
ACAAAGATCT TTGAGCCACA TTCCATTCTG CAGCTCTAGC CGCGCGCTGC CCAGGCTGCA 780
GGCATAGCAC TGCACCACGC TCCGGCAGAC CCTGGCACAA CTAACCACCA TGGGCGTGCC 840
CGCAGGGCCG AGCTACCCTA GAGGTCCACG CGCACGAATG CGCGCGCTCG CGTACACACA 900
CACACAGATA CACACACGGA ACCCGTGTGA CACCGCACGC CAGCCGCTTG CTCCCACCAC 960
CTCCCCCGCG TCCTTACGCC GACGCCTCCG AGCGTGACCG GCGACGGGAC GCACGGTCAC 1020
ACCACTCGAG GAAGGCATCC ACGCGCGGGA AGTGTCCCGC CCTGCCGGTT TCTCCCAGCT 1080
CCCAGGGCCT GAGATCCAGC CCACATTCCC GCGCCTGCTC CGCACTTACT GTCTGCCCAC 1140
TCTGTGGCTG CGGCTTTGGC TGCGGCCAGG TCTCCCGCGC CGCCTCGAGG GTGTGCGGGC 1200
TGAGCCAAGG AGGTGCCGGC GGCAGCCCAG AGACCGAGCC GCCGGCGGCC GTCTGACTAG 1260
GACCCCCCTC CTCCCGCCCT CAAAAGCCCC CTCCTTGGGA GCTTAACCCT ACCAGAGCTG 1320
CGTCTCCCTA CGTGCCGCAC CCTCGCCACC GGCTCTCGCC ACCAACCGCC TTGAACCCAG 1380