EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM028-15890

Organism

Mus musculus

Tissue/cell

Cerebellum

Coordinate

chr19:6541160-6542350

Target genes

Number: 23
Name	Ensembl ID

Arl2	ENSMUSG00000024944
Gpha2	ENSMUSG00000024784
Ppp2r5b	ENSMUSG00000024777
Atg2a	ENSMUSG00000024773
Ehd1	ENSMUSG00000024772
Gm14963	ENSMUSG00000085196
Cdc42bpg	ENSMUSG00000024769
Men1	ENSMUSG00000024947
Map4k2	ENSMUSG00000024948
Sf1	ENSMUSG00000024949
Gm14966	ENSMUSG00000079467
Pygm	ENSMUSG00000032648
Rasgrp2	ENSMUSG00000032946
Gm14965	ENSMUSG00000084876
Nrxn2	ENSMUSG00000033768
Gm14964	ENSMUSG00000052188
Slc22a12	ENSMUSG00000061742
Gm14967	ENSMUSG00000085694
Hmgb1	ENSMUSG00000084221
Prdx5	ENSMUSG00000024953
Gpr137	ENSMUSG00000024958
Fkbp2	ENSMUSG00000056629
Vegfb	ENSMUSG00000024962

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

E2F7	MA0758.1	chr19:6541880-6541894	TTTTCCCCCCAAAT	+	6.44
Hnf4a	MA0114.3	chr19:6541707-6541723	AGGGTCAGAGTTCAAT	+	6.28
NR2C2	MA0504.1	chr19:6541706-6541721	GAGGGTCAGAGTTCA	+	6.25
RXRB	MA0855.1	chr19:6541707-6541721	AGGGTCAGAGTTCA	+	6.03
RXRG	MA0856.1	chr19:6541707-6541721	AGGGTCAGAGTTCA	+	6.11
SPIC	MA0687.1	chr19:6541372-6541386	TACTTCCTCTTGCT	-	6.1

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_08153

chr19:6537487-6549986

Kidney

Enhancer Sequence

CCACTGGAGG GAAAGAGGGG CAGAGCTGTG ATCAGGAGGG GCATGGCCTG GGCTGTGTGG 60
GGCCACGAGG GCGCCCACAG GCTTAGTGGC TTGGTTTCTT AAGGAGTATC CTGTCAGCCC 120
TATACTGCGT CAAAGGTGGA GAGCCTCCAG CTTCATCTGC TCCCTCTTGA GCCTTGGCCC 180
GTAGCTGAGG AGCCTTCCCT TCGCTGGAGG CTTACTTCCT CTTGCTCCTC ATGCAGGGTC 240
CTTCCTGCTT GCTGGGGCAG CTGGCCCTCT CCACTGGCTT CCCCTCCCTC ACCTCTCTTT 300
TGGTTTTTCA TCTCAAGACA GAGTTCCCCT GCCTGGCTGT CTTAGAACTC ACTCTGTAGA 360
CCAGGCTGGC CTCAAACTCA GATCCTCCTG TCTTTGTCTT CTGAGTGCTG GGATTAAACA 420
TACACCACCA CCACCTGGCT CCTCGTCTTC ACATGCACGT GCGTGTGCGT GTGAGTGTGC 480
GTGTGTGTGT GTGTGCGAGA GAGAGAGTGT GTGTGCGTGC ATGCCTTTCC ATGGTGTAGT 540
GCTTGTGAGG GTCAGAGTTC AATCTCTGGA GCTGTCTACA CTGTTTTTGT GAAGAGGTCC 600
TTCAGTGACC CTGGGGCTCA CTGGCTAGGC TGGCTAGCCA GCTAGAGCTG AGCCCCAGGG 660
GCTCCCTTGT TTCTGCCTCT CCAGAGCTGG CATTACAGTC CCACCACCAC TGAGCCTGGC 720
TTTTCCCCCC AAATGCTGGA GAGCTGAACT CAAGTCTTCA TGCTTCAACA ACAGACAGTT 780
TGCGGATTTA TCTCCCCAGC CTGCCAACAT CTCTTATAAG AGGCCAATGT TTGTTCAGGT 840
CCTCTGTGCT CAGCCCAGAG ACAGACGACA GGATCCTGTG TCTAGGTGGC CTGGAGTCAT 900
GGCAGAGGTT CAACTATGGG TAAAGCCATC GGGTGATGTA GAAACAGGAA TGGTACCCCA 960
GGCCAGGCTG TGTGGACATA CCTCACTGTG TGGCCCAGGT TGGCCTCAGA CTCAGGAATC 1020
CTCCTGTCTC TTTAGAGATG GGGTCATAGG CATGAACCAC TAACTATGAC CTTGCAGATG 1080
ACTCCCGCTG CCCAGTCCCC TGCAAGCCTA CATGGCTGCT CCCAAGTGAG GAGGCTTGGG 1140
GAGGTGCATC CTTTCTGTGA CTGTGACTTT GACCTCCCAG GTGCTGTTAC 1190