EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM028-15885

Organism

Mus musculus

Tissue/cell

Cerebellum

Coordinate

chr19:6537850-6538410

Target genes

Number: 22
Name	Ensembl ID

Arl2	ENSMUSG00000024944
Gpha2	ENSMUSG00000024784
Ppp2r5b	ENSMUSG00000024777
Atg2a	ENSMUSG00000024773
Ehd1	ENSMUSG00000024772
Gm14963	ENSMUSG00000085196
Cdc42bpg	ENSMUSG00000024769
Men1	ENSMUSG00000024947
Map4k2	ENSMUSG00000024948
Sf1	ENSMUSG00000024949
Gm14966	ENSMUSG00000079467
Pygm	ENSMUSG00000032648
Rasgrp2	ENSMUSG00000032946
Gm14965	ENSMUSG00000084876
Nrxn2	ENSMUSG00000033768
Gm14964	ENSMUSG00000052188
Slc22a12	ENSMUSG00000061742
Gm14967	ENSMUSG00000085694
Hmgb1	ENSMUSG00000084221
Prdx5	ENSMUSG00000024953
Gpr137	ENSMUSG00000024958
Fkbp2	ENSMUSG00000056629

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

LEF1	MA0768.1	chr19:6538072-6538087	ATGGCTTTGATCTTT	-	6.8
TCF7L2	MA0523.1	chr19:6538073-6538087	TGGCTTTGATCTTT	-	6.49
Tcf7	MA0769.1	chr19:6538075-6538087	GCTTTGATCTTT	-	6.62

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_03678	chr19:6536036-6539956	Cerebellum
mSE_08153	chr19:6537487-6549986	Kidney

Enhancer Sequence

ACCTAGGAGT GAGGGTGGAT GGATTAGCCT GGGCTAGCTG CTCTTCTGTC TGCCCCATTG 60
GCCTTTTCCA GGCTCACCTT AGGCACTGGG AGGCAGAGGC TGATGGCCTC TGGGGGTCAG 120
CCTATGGGAG ACCAGGCATT TCTCTCTGCT CAGATGCTCC ATTCAGGATG CTATCCCATT 180
GGCTCTAGCT TCCACTGATT AGACCCTGGC TACAGAGTCT TCATGGCTTT GATCTTTGTT 240
GGGTGGCCTA AGCTTCAGGC TTGGGCAATA GCATGCGTGT GCTTAGTACC TCTAAACAGG 300
ATGGAGCCGC CTGTCTGCTG GGTCGCATTG TGCCTGATTC ACCTTCCAGC TTTCCCAGCA 360
TCACTGTCCT GAATCTCAAT CAATCCTTTC TAGGCACTTG GGCCTGTAAT CTTGTTCACC 420
AGCCCACCCG GCCTGGCTTG TCTCTTCCTG GAGCCTAACT ATAGATAGCA AGGTCATCCC 480
TAGCCTCGGC CCCATCCTTG GCTGCTGGGG GCTGGCTTGG CTCAGGCTTC CCTGTAACTG 540
ATAGTCTTAG GTAGAAGGGC 560