EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM028-15579

Organism

Mus musculus

Tissue/cell

Cerebellum

Coordinate

chr19:4744550-4745100

Target genes

Number: 23
Name	Ensembl ID

Ndufv1	ENSMUSG00000037916
Adrbk1	ENSMUSG00000024858
Syt12	ENSMUSG00000049303
Pcx	ENSMUSG00000024892
Lrfn4	ENSMUSG00000045045
Gm960	ENSMUSG00000071691
Spnb3	ENSMUSG00000067889
Rbm4b	ENSMUSG00000033760
Rbm14	ENSMUSG00000006456
Ccdc87	ENSMUSG00000067872
Ctsf	ENSMUSG00000083282
Zdhhc24	ENSMUSG00000006463
U6	ENSMUSG00000088661
Bbs1	ENSMUSG00000006464
Dpp3	ENSMUSG00000063904
Peli3	ENSMUSG00000024901
Mrpl11	ENSMUSG00000024902
Slc29a2	ENSMUSG00000024891
B3gnt1	ENSMUSG00000047379
Rin1	ENSMUSG00000024883
Tmem151a	ENSMUSG00000061451
Rab1b	ENSMUSG00000024870
Klc2	ENSMUSG00000024862

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

SOX10	MA0442.2	chr19:4744770-4744781	TCCTTTGTTTT	-	6.32
Six3	MA0631.1	chr19:4744892-4744909	GAAGGGGTATCACATTG	+	6.73
Sox3	MA0514.1	chr19:4744611-4744621	CCTTTGTTTT	+	6.02
Sox3	MA0514.1	chr19:4744771-4744781	CCTTTGTTTT	+	6.02

Enhancer Sequence

ACCAGGTGAG GCCAAGGGCA AGGGTGAAAA CAAAGTTCCC AAGAGCATCT TCTCACTCAG 60
ACCTTTGTTT TTTCCCTTGT TTTGTGGTGA TGGGAGGTAG AGGGTGAGTG CTGTTGATTG 120
GAGATAAGGC CTTACTATGT ATCTTTGGCT GGCTTTGAAC TCAAAGAGAT CCACTTTTAT 180
CTGCTGGGAT TAATGGTGCA TGTATGCTGC CATGTCCGGC TCCTTTGTTT TTCCCTATGA 240
TAGGGTGTCT GTGGCATTAT CTTGTTGCTT GTAGCCCTAG ACTTGATTTT TCTTCCCCAC 300
ACTCGGGAGA GTGGCCTCTG TTGATAGGAA AGAATGAGGA TTGAAGGGGT ATCACATTGT 360
CCCCCACCCA CCCAACCGTC CCCACCCACC CAACCGTCCC CCTCCGGAGT CTTGACAAAG 420
AGTCTTTGAG AGGATTCAGA AAAGAGAAGA ATGTAGGGAG GGCTGGAGGG CTCAAGGTGG 480
AGCAGGTAGG TCCAAGGGGA CACAGGCTTG CAGTTCCTTT TGCAAGCCTT TCAGTGTGTC 540
TTCTGTTGCT 550