EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM028-15563

Organism

Mus musculus

Tissue/cell

Cerebellum

Coordinate

chr19:4547540-4549260

Target genes

Number: 13
Name	Ensembl ID

Aip	ENSMUSG00000024847
Ppp1ca	ENSMUSG00000040385
Adrbk1	ENSMUSG00000024858
A930001C03Rik	ENSMUSG00000087132
Syt12	ENSMUSG00000049303
2010003K11Rik	ENSMUSG00000042041
Pcx	ENSMUSG00000024892
Lrfn4	ENSMUSG00000045045
Rce1	ENSMUSG00000024889
Rbm4b	ENSMUSG00000033760
Rbm14	ENSMUSG00000006456
Ctsf	ENSMUSG00000083282
Klc2	ENSMUSG00000024862

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Myog	MA0500.1	chr19:4548675-4548686	AACAGCTGCAG	+	6.02
NFIC	MA0161.2	chr19:4549038-4549049	TATGCCAAGTA	-	6.14
Nr5a2	MA0505.1	chr19:4548925-4548940	GCTGGCCTTGAACTC	-	8.25
Tcf12	MA0521.1	chr19:4548675-4548686	AACAGCTGCAG	+	6.62

Enhancer Sequence

GAGATTCCCT CTTCTTAGAT GACTCTAGAT TGTGTAAGGT TGACAGAAGC CTAGTTAACA 60
CAAATGCCAA GACCTTTATC CAAACTGTAG CAGTATAGTT GATAGTTGAA TCATAGAGTC 120
AGTCTGTTGG GTTCAAGTAC TCAACCAGAC ATAATGAGAA AGATTAACTC AGACAACTTA 180
AGTTATATAT TTAAATGCCA ATGCCAGGGT TGTGGCTGAG AGGTAAAACA AGTGCTTAGT 240
ATGGATGAGA CCCTTGATTC AGTGCTCTTG CACTAAAGTA GATATTTAAA ATGTTGTATT 300
TTACACACAC ACACACACAC ACACGAAGTG ACAGCTCTGG GATCTGGGGT TCTGGTTTCT 360
TTAAAACACC CACAGAAATA TTATAAGAAT GCGCATGTGG TTTAACCCCA GGTGTGGCGC 420
GTGGTGCTGC TTTGGACTGT CCACAGCAAC TGACGATGAC TTGCCTTGTA CTCTAGCCGA 480
GCTATGGTTT TGCCAGCTGC AGATAATTTC TGTGAATGTG TGATGTTTGG AATTCTGGGA 540
AATTTTCAGA AGGTATATAA ATGCTGGGGC CCTACTAGGT GGAGTTGGTT GTTCAGGGGG 600
ATTGATTGTG GTTTGTGAGT AGTCCTGTTC AAAGTAGAAA CAAAGACATT AAATTCACAA 660
ATCACTTTCT CTCTCCTCTA TCCTTTTTCT CCTGCCTAGT GATAGGGGGT GAAATGAGGG 720
GGATAAAGGA TGGGAAAAAG AAGCCACAGA GTCCCGAAGC CTGGCTGCAG ATGAGAATTC 780
ACATGGTTAT TATTCATAAT AACTCTCAAA TGGAATCAGC CCAAACTTTC ACCACCTAAT 840
GAATGGATTC TTATTCAGCG GCAAGAAATA GTGAACCACT GACACTTGCT GCAGCCTGGG 900
GAAGCTTAAG AATACTGCTG CCTCAGAGAC CAGGCCAAAA GGCGACATGC TGGGTGACAT 960
TCCTGGGCAC CACTAGCATG GGCAGAAAGC CAGAGTGGTG ATTTCCAGGG TTGGAGGAAC 1020
AGAGAATGGG GTATCTGGTT TTGTTTTGTT TTGCTGATGG AAGTGCTCTG AAATAGATGG 1080
TGGTGGTGGT TGCACAGGAT CGTAACTCTA TTGAGACCCA CTCAGCTCTG TACTTAACAG 1140
CTGCAGTGGT GAAAACATGA CACACTCAGC AGAAGTAGCA AACTCAAAGT TTAATCTCCT 1200
CCCTGCACAC TTGTCTTTGT AAGTTCAACT GTAGGTCATA TGTGCTCTCA TACCTAGAGT 1260
AAATGCAGTT ATAGAATAAC ATGTGTTAAG TCTGTTTGGG TTTTGCTTTA CATTTAATTT 1320
TTTTTTTTTA AAGAGACACT CCTCTGTGTA GCCCTGGCTA TCCTAGAACT TAACCTGTAG 1380
ACCAAGCTGG CCTTGAACTC ATGAAAATCT GGCTCCCTCA GCCTCCCTAG TGCTGGGATT 1440
AAAGCCATGC ACCACCATCA CCACCCCATA GTAAGGTATT AAAAAACTCT TCCTCTGTTA 1500
TGCCAAGTAC TTAAGAAGTA TTCTATAAAT ACTTATTGAG TTATCTATGT TTGCTATTTC 1560
CAATTCATTA GTGTGGACAC ATTTCAGGTT AGTTATAATT ACCTATTATT TTCATAAAAG 1620
GTAGTATTCT TTAAATGATG TGCTTTTCAG TAAGAGCTGC ACAGGATCCT GTTCTTACTT 1680
GTTTGCGTGT TTTGTTTTGT TTTGTTTTGT TTTCCTGTCT 1720