EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM028-15492

Organism

Mus musculus

Tissue/cell

Cerebellum

Coordinate

chr19:4109990-4110490

Target genes

Number: 25
Name	Ensembl ID

Chka	ENSMUSG00000024843
Tcirg1	ENSMUSG00000001750
Ndufs8	ENSMUSG00000059734
Aldh3b1	ENSMUSG00000024885
Unc93b1	ENSMUSG00000036908
Gstp1	ENSMUSG00000060803
Gstp2	ENSMUSG00000038155
Cabp2	ENSMUSG00000024857
Cdk2ap2	ENSMUSG00000024856
Pitpnm1	ENSMUSG00000024851
Aip	ENSMUSG00000024847
Tmem134	ENSMUSG00000024845
Cabp4	ENSMUSG00000024842
Gpr152	ENSMUSG00000044724
Coro1b	ENSMUSG00000024835
Ptprcap	ENSMUSG00000045826
Rps6kb2	ENSMUSG00000024830
Gm17552	ENSMUSG00000090702
Carns1	ENSMUSG00000075289
Tbc1d10c	ENSMUSG00000040247
Ppp1ca	ENSMUSG00000040385
Rad9	ENSMUSG00000024824
Pold4	ENSMUSG00000024854
Adrbk1	ENSMUSG00000024858
Syt12	ENSMUSG00000049303

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Nr2f6(var.2)	MA0728.1	chr19:4110142-4110157	GGACCTTTTGACCTG	-	6.28
RARA	MA0729.1	chr19:4110139-4110157	CCAGGACCTTTTGACCTG	-	6.4
Rarb	MA0857.1	chr19:4110142-4110158	GGACCTTTTGACCTGT	-	6.57

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_01385

chr19:4093691-4170314

Th_Cells

Enhancer Sequence

TGCTGGGTAC AACACCCCCA CCCCAGCCAA AATTAAGGGG AGAGGAGACA GTAAAAGATA 60
GGAAGTAGCC CCCACATCAT AGATAACCTC TCATTTCACC TCTCCCAGAT ACAAGAAACA 120
CTCCCCTTCT CCCATAGGAG TCAGGGTTCC CAGGACCTTT TGACCTGTGT CAAGTAGGAA 180
CCAGTGACTA GTCTAGAGGG GCATTGGCAT GTCGATGTGC ACATGTGTAA GATTGTACCT 240
CTATGTGCAC TTGGTTGCAT GTACTAGAGG GGAGCATGTA TATGTTTGTG TGTTTGGGGA 300
GAGCAAGCAT ACTTTTAGGA TTTTTGCTGA CTATTGTATA CAACCAGAGA CAACATTGTC 360
TCTGCCCTGG AAGTCTTCAG CTTCAGCCAA CCAGAGAGGC CAAAGGGACA GAGAGTAGAG 420
GCTCAGGAGC TGAGTAATGG CTGGGACCAC TGGGAGAAGA GGCATGGGGG TAGTCTGATG 480
CTTAGGTCGG TCCTCTTCCT 500