EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM028-13718

Organism

Mus musculus

Tissue/cell

Cerebellum

Coordinate

chr17:34766640-34767570

Target genes

Number: 28
Name	Ensembl ID

H2	ENSMUSG00000060586
BC051142	ENSMUSG00000057246
Notch4	ENSMUSG00000015468
Gpsm3	ENSMUSG00000034786
Pbx2	ENSMUSG00000034673
Ager	ENSMUSG00000015452
Gm20463	ENSMUSG00000092395
Rnf5	ENSMUSG00000015478
Agpat1	ENSMUSG00000034254
Egfl8	ENSMUSG00000015467
Gm20460	ENSMUSG00000092176
Ppt2	ENSMUSG00000015474
Prrt1	ENSMUSG00000015476
Fkbpl	ENSMUSG00000033739
Atf6b	ENSMUSG00000015461
Tnxb	ENSMUSG00000033327
Cyp21a2	ENSMUSG00000092471
C4b	ENSMUSG00000073418
Skiv2l	ENSMUSG00000092543
C4a	ENSMUSG00000015451
Stk19	ENSMUSG00000061207
Dom3z	ENSMUSG00000040482
Rdbp	ENSMUSG00000024369
Cfb	ENSMUSG00000090231
Zbtb12	ENSMUSG00000049823
C2	ENSMUSG00000024371
Ehmt2	ENSMUSG00000013787
Abhd16a	ENSMUSG00000007036

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Crx

MA0467.1

chr17:34766724-34766735

CTAATCCCCTT

6.32

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_03855	chr17:34763253-34767818	Cerebellum
mSE_11094	chr17:34763622-34767850	Olfactory_bulb

Enhancer Sequence

AAAAGTCAGG TAAAAAAAAA ACTATATATA TATATATCCC TCCCCCAACC CCCTCTGTCA 60
TCTCCTACCT AACCTCCACT TGCCCTAATC CCCTTCTTTG ACCCCCTCTG GGATGTTGTG 120
TGGCTCAGTT CCATTCCTTC TCTCCATGCA TACCCCACCC CCTCCCCTTT CTATATCCCA 180
TCCTTCTCTT CCTTCGGGTC AGTCTGCCTC TGTCCCTTGG TCCCTTGTCA ACAACATGGG 240
GGGGGGGTGC AGTTTTGAAA TGGAAAGGGA GGCAGAGCCA GGTTCTGCAG GGACATCATC 300
CCTGGGAGTG ACAGATGGAC AGTCACCGGT TCAGTGGCAT GGAGACACCC AGTGGAAAAA 360
TAACGGAGAC TTAATCAGAC TGGGTTGTTG GGAAAGTAAT ATCTAGAAGA CAATTTTTTT 420
TCTTCTTTGA GATGAGATTC CCCTCTGTAG CCCAGGCTGG TCTTGAACTT CCCAGTTCTT 480
CACCCTTCCC CGGCTGCTTC ACAAGTACAA GGATTACAGG CATGAACCAC TATGCCTAGT 540
CCCAGAAGCT TTGTCATGGA CCTTAACGGA GGCCCATGAG ATTCCCAGGT AACTCCACCT 600
GAAGCAAAGT GGAAATGTTA AACTGAGCGT GCATGACCCC TGTGACACGA CCACATGTGC 660
AGGAAGAGGG GACAGCTGGC TCAGAGACAA CCCTGAATGA GGGTTGTGGT TGACAGCAGC 720
GGAGCCTGGG AGGAGCTGTG ACAGTTGTGA CGGCAAAACT AGATTGGGGC CAGGTGGCCT 780
ACATACAACC CCTTCCCTGA CCCCAAAATG GGAGATGTCG TCTCGGCTGT ATCTCCCTCG 840
CTCTTTCTCC ATCTCTTGCT GTCTCATGTC TCTTACCCTT CTGATCTCTG CTGTCTTCTC 900
TCTCCCCTTA TCCTCTCCTC GGCTTTTCCA 930