EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM028-13528

Organism

Mus musculus

Tissue/cell

Cerebellum

Coordinate

chr17:31557230-31559060

Target genes

Number: 8
Name	Ensembl ID

5S	ENSMUSG00000089622
Rsph1	ENSMUSG00000024033
Pde9a	ENSMUSG00000041119
Wdr4	ENSMUSG00000024037
Ndufv3	ENSMUSG00000024038
Pknox1	ENSMUSG00000006705
Cbs	ENSMUSG00000024039
U2af1	ENSMUSG00000061613

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

DMRT3	MA0610.1	chr17:31558993-31559004	CTTGATACATT	-	6.02
Myod1	MA0499.1	chr17:31558399-31558412	TGCAGCTGCTCCT	+	6.15
RREB1	MA0073.1	chr17:31558050-31558070	TGTGTGTGTGTGTGGGGGGG	-	6.17
RREB1	MA0073.1	chr17:31558048-31558068	CGTGTGTGTGTGTGTGGGGG	-	6.61

Enhancer Sequence

CTGGTAAGGC CCTGTTATCA CCTTTTAAAT AAGGAGAGAG AGAGAGAGAG AGAGAGAGAG 60
AGAATTCCAG CCTCCCCTCC CCCCTCCCCG TGTGATGTAA TGCACATTGA TAGGTGTTTG 120
AATCTGCTAC CACTGCGGAG TCTGACGCTG TTCACATCCA GGTGGCCCCT CTGAGTTCCC 180
ACCCCAACAT GATCAGGGGT TCATTTCACC TCATTCTACC TGGGTTCCCA GGCCCACACC 240
CATCTCCATT CCTATGAGCT GCAAAGTCAG GTCTCCACCC ACAAGGTTTC CCAAGGGTGC 300
TTCAGCCAGG CATGGGATTC TTACAGAATC CCATTTCCTT TAGGATTTTT TTAAAAAAAA 360
ATCATTTCTA TTTGTATGTG ATTTATGCAC AATAAGATGC TCTCGCTCAA GCGTGCTAGC 420
ACCTGGATGC ATCCTGGAGC ATCTGCGCGG GTCGCTGTCA CCATCGGTGA AGTCAAGGTT 480
CCGTGCATAT TTATTCTCTT GTGTCCCTTG GTCAGCTGCC TCTGTCCACA GCTGGCTCAC 540
TTTTGGAGAC CGTCCAGTAG GCTGTGTTTC CCAGAGTTTG TGTGAGGCGT TAGGGAGGAG 600
GGGTATACAT GTTTTCCATT CCTGACTCTG CGCATACGTA TGGAGCCCAG ACTTGAACCT 660
CCAGTCGATG TCCTTCCTTG TGAACCAGCT CCTCATGAGT TCCGTCTTGC TTCTTGAGAC 720
AGGGTCTCTC GTTGTCCTGG GTCTCGCTGA CGAGGCTAGG ATGGCTGGCC TGTGAATCCC 780
AGGGATTCTC TTGTCTCTGC CTATCCAGCC CTGGATACCG TGTGTGTGTG TGTGGGGGGG 840
CACCTTACCA ACTGTGCCAG TCTCCCCAAC CCCCTTTCCA GAGTTTCATG CAGAAAAAAT 900
GACCCAGGAA GTGAGTTTGC ATGAGGCTTC TTGGATCCAT CGGTGTCACG AGCACCAGCC 960
TCTGTGCCTG GTAGTTGCTA AGGGGCATCC TGATGTTTTT CCTTCATTTC CGGGTGACCT 1020
TGGGGTCGTT TTTTTTTTTT TTTTAATGAA TCAAGCTGCT ATGGATTAAA GAGTGGGGGG 1080
TGGGGCTCGA GTGGGGCTGT GCAGTCCTGG GGTCAAGTAT AAGTTTAGCT CCATCCAAGC 1140
CTGCTGCTTC CTTTTTCTGG CATCTCTGTT GCAGCTGCTC CTTTCTTGGA GCTCTGGAAG 1200
TGTCAGTCCC TCTGATGGCT GCAGATGTAG AGTGTGCCGC GGTTTCCATT TGTGCATTTT 1260
TTTTTTTTAC TTTAGTTTGT GATTCCCTAA TGATGACTGA CCATGCGTAT CTTTGAAGTA 1320
TCTGTTTTAT TTTTATTTTA TGACATCTCT GGCCAGCTCC TCAGTAGCTC TCGGTGGCCA 1380
CTCCCACACT CACCGGGTCG TGAGTCTTCT TGGCGTGAGG AAGAGTCACG CTTAGTGTCT 1440
CGCCTGTTGA CTTGATAAAA TACTCTGACA AACGCAGCTG AGGGAGAAGG GGTTCCTCTT 1500
GGCTCACAGT TCAAGGCTGC ACCGTCCATC CTGGTAGGGA AATCAAGGCG GCAGGAGCTT 1560
AAAGTTGGTT ACATGGCATG TATAAGGTTC TGGGTTAAAT TCCTACCACT GCAAAAATGT 1620
GTGTCCATAT ACATATACAC ATATATATAT TCATATAATA CATCATATGC ATCATATACA 1680
TATGACTCAT ATACATCATA TACACATATA CATCATATAC ATATACTACA TATACATATG 1740
GCTTTTGTGC TGGAAAAGTC AATCTTGATA CATTCTCAAA GAATGAGGTT TTGTGTAACT 1800
CTGGAGCCAA GCTATACTGG AGTTAGGTTC 1830