EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM028-13176

Organism

Mus musculus

Tissue/cell

Cerebellum

Coordinate

chr17:25407310-25409480

Target genes

Number: 19
Name	Ensembl ID

Tbl3	ENSMUSG00000040688
Rps2	ENSMUSG00000044533
Hagh	ENSMUSG00000024158
Mrps34	ENSMUSG00000038880
Nme3	ENSMUSG00000073435
Mapk8ip3	ENSMUSG00000024163
Cramp1l	ENSMUSG00000038002
Ift140	ENSMUSG00000024169
Tmem204	ENSMUSG00000024168
Telo2	ENSMUSG00000024170
Clcn7	ENSMUSG00000036636
BC003965	ENSMUSG00000067722
Unkl	ENSMUSG00000015127
Gnptg	ENSMUSG00000035521
0610007P22Rik	ENSMUSG00000015126
Baiap3	ENSMUSG00000047507
Ube2i	ENSMUSG00000015120
Tekt4	ENSMUSG00000024175
Lmf1	ENSMUSG00000002279

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

NFYA	MA0060.3	chr17:25408791-25408802	AGCCAATCAGA	+	6.32
Nr5a2	MA0505.1	chr17:25409074-25409089	GAGTTCAAGGTTAGC	+	6.4

Enhancer Sequence

CAATGGGTAT TTCACACTGA GTTGCTTCTC AGAGGTTCCA TATTTGACCC CAGCTTCAGG 60
CTTCCATTAG GCTTGTGGGT AAAATCTCCC AGCTGGACTA GCACTAGCCT AGTCTCTCGT 120
TTTCAGCTCA GTCTTCACTC TGAGGCGGAA CCTCCAACCA CCTCTAGACA AGAGTAAGAT 180
TCTTGCCAGA GCACATCCCT GCTACAGCTT CTGCCAGGCT TCAAGCAGAC CTCCCATGAG 240
TTCTTGCTAT TTAGACTTAG CTCAGGCTGC CCATTTTATC TGCAAAGCTG TGACTACCCT 300
AGGATTTACT GCGTGTTCCT GACCCAGCTA GGATCCCTGG GCTACAGGTG GGCTGATCAG 360
ATATGCACCT CCATCTGTAA GCACAGTTGT TCTGAACCTG AACAGACAGA CCCACTGGGT 420
CAAAGCATTC TGGTGAGTCC TGCACTGAAG TTACAGATGA CTTGTTTTAA GTTCAGAGTC 480
TCACACTGTA GCCCAGGTTA GCCCAAAACT CCTGGCTAGC TCCTGGTATT GGGATTACAG 540
GCATGAGCCA CTACATCTGG CTCCTAGACC ACTTTTTCTT TCTTTCTTTC CTTTATTTTT 600
GGAGACAGTC TCACCATGTG GCCACAGCTG GCCTTGACAG TCACGCACCA CAGCACCTAG 660
ACTGCTTGTG ATGACTGTAC AAATCCAAGT AGAGAGGGGC TGGGACTGCC ATCAGAGGTA 720
CAGCATCACC CCAGAGCCCA GAGTTCAGGA AATACTTCAG TGGGTGAGGT CATTGTAAGA 780
CAAACACTTC ATATCAGCAT TTTTAATATC CTGTACACTC TAAGCCAACA TGAAGAACCT 840
CTTTTAGAAG CACAAGCTGG GACTGGCGAA ATTAAGAGTA CTAGATGCTC TTCCAATGGG 900
TTCAACTCCC AGCACCCACA TGCCAGCTTA TGATTGCCTG AAACTCCAGT TCCAGGGGAC 960
CTGGATGCCC TCGAACACAC AAACATACAG GTAATAGTGC ACATAAAATA TATTAAAAAA 1020
AAAAAAGCAC AAGCCACCAG GACAAGCCTT GACAATGTTG GCATTCCTTC TAAGCATACC 1080
TGGCTCTATC AAACATCCCG ATTCCTTTTT TTATAAATCA CAACAGACAG TACTTATGCT 1140
CCACAAACTC CAATACCAAA TCACAAAGTA TACAAATTAA AGGCAAGGCT CCTCTCTTAC 1200
AGACCTCAAG TCCAAAACAG AGAGTCCAGC CCAAACCCAA CTGTCTTTTC CTAGCACAGG 1260
AGTAGAGCCT GTCTAGGAAC AAGCACCAAG GTTCTGCCAC AAAACCCCAA CCTGCCCTAA 1320
TAGTCATCTC TTAGGCAATT TACGACCCAG GTGGCGCTCA TCTAAGAGTG ACTGGAGCAT 1380
AGGGCTTCAC TTCCAATGTG TCCCTCTTTT CAACTTCTCA ACGCACAGGC CTGCCCAATC 1440
TCTTTCTCTA GCATCTTCCA CTGAAGCAGC TATCCTCATC CAGCCAATCA GATGGCAGAA 1500
GATGGCAAGC AAGTCTGGGC AGGGTTTCCT AACAGGTTTC TCTCTGGAGC CCGGGGCCAG 1560
TGCTCTGGAG AAAGAAGCCT GGACACCGGG CCACACAAAG CTGTTGGGAC AGCTGTAACT 1620
GACTTCAGGA TAAAGTTGTG TGCCCAGAGA ACTCTGTCCT AGCATCCAAC TGCAGCTATC 1680
CTAAGTGAGA AGAACCGAGA AGCTAGCTCA ACTGCTCTTG CCTGGACACT CAGTGTTAAG 1740
GAGACAGAAC CAGGGAATCA CCAAGAGTTC AAGGTTAGCC TTGGCTACAA GAGATCCTGT 1800
CTCAAAAACA GGGAGAAGTG AGAGGTGGCT CTTATCAGAA CTCTTAAAGG CCTTTTGCCC 1860
CACGGTCGAG GAAAAGGAAC CCTAGGAGCA CCCTGGCAAT GATCTAGGCA GAAACTTGGG 1920
GGGCAGTGCT GCTGCTCCCG CAAGCACTCC AAAAGCCACT TAAACACAAC TTGCCTTCCC 1980
AGGCAAACAG TCACTTCACG AGCTAAAAGT TTTGTGATGC AATGACCAAA CTAAACCAAA 2040
CCAAACCAAA AAACCATTCC CCTCCCCACT ACTAGAGACA GGAAGGACAT ACAGGGATGG 2100
GTCTTATGAC TCCAGGCTTC CTACAGTGTA CAGTATTTGT CTGGCGACAC CACCTACTTC 2160
AGAGCTACTT 2170