EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM028-11699

Organism

Mus musculus

Tissue/cell

Cerebellum

Coordinate

chr16:4974270-4976230

Target genes

Number: 22
Name	Ensembl ID

Pam16	ENSMUSG00000014301
Vasn	ENSMUSG00000039646
Dnaja3	ENSMUSG00000004069
Coro7	ENSMUSG00000039637
Nmral1	ENSMUSG00000063445
Hmox2	ENSMUSG00000004070
Gm15835	ENSMUSG00000086464
5730403B10Rik	ENSMUSG00000004071
Fam100a	ENSMUSG00000039568
Mgrn1	ENSMUSG00000022517
Nudt16l1	ENSMUSG00000022516
Gm16861	ENSMUSG00000086456
Anks3	ENSMUSG00000022515
4930451G09Rik	ENSMUSG00000022543
Rogdi	ENSMUSG00000022540
Glyr1	ENSMUSG00000022536
Ubn1	ENSMUSG00000039473
U6	ENSMUSG00000077367
Ppl	ENSMUSG00000039457
Sec14l5	ENSMUSG00000091712
Nagpa	ENSMUSG00000023143
Fam86	ENSMUSG00000022544

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3	MA0041.1	chr16:4975914-4975926	AAACAAACAAAC	-	6.32
Nr5a2	MA0505.1	chr16:4975040-4975055	GCTAGCCTTGAACTC	-	6.13
RARA	MA0729.1	chr16:4975263-4975281	AATTGAACTTAGGACCTC	-	7.22

Enhancer Sequence

AGGTGAGACT TCCCAGCAGC CACAGCCATT TCCTTAGAGC CGACCTGCCT CTGGGCCATG 60
CTAGTTGGGC CTATTTAGGC AAATGCTGCA TTTTCTGTTT TCTTCATGGT AAAGCAGAGG 120
TTCAGATTGC CGTGCCTTTC TCAATCCATC AATGGCAAAG CTGTGTCTTG TTCCTAATGC 180
TAAAGGTACT TTGTCTTCAC TATCTGCGTG ACCAGTGGGA ACAGGATGGC ATAGGAGGAT 240
AGAAGGGATG TGGGCAGCAA CCTGTCCTAG ACATGGAAAG ACAGAGTGAT GCTGGGGGTG 300
GCAGAGGTGG AAATGGGTCC CCCAAGGCCT GCCTTTCCCA CACACTTCTT CCACTGCTGT 360
TAGGAGTCTG GGAGCCTTTT CTGTGAAGTA GTCGGAAGTT CTGCCTGGCA AGCAGAAGGA 420
GCAGACATGG CGAGGCCTGT GCTTTCCAGT ATGAAATCCA CCAGCTCCAT GTGATTACTA 480
AGCACCAGAA ATGCGGCTAC TGGGCTGCAG ACTTTAATTA TATGGATCTA CTGGGCATGA 540
CTAGCTTGAC TGCATAAACA GCCACCTGTG CTAAGTGGCC CCCAACTGAA CAGAGCAGAT 600
GGAGGTTTAT GCTAGAGGAG TGAGCTCAGC CTCACACCTG CTTGGCTCTA CCACTGTGCC 660
GCAAGCCTCA CGAGCCTTCT TTCCACTCTT TTGTTGTTGG GTTTTTTGTT TGTTTTTGTT 720
TTTCAAGACA GGGTTTCTTT GGCTGTTCTA GAACTTGTTC TGCAGACCAG GCTAGCCTTG 780
AACTCACAGA GATCCCCCTG CCTCACCTCC TAACTGCTGG GACTAAAGGT GTGCACCACC 840
CCACAAACCC CAGCCTTCTT TTTACTTTTT ACTTTTTTTT TTTAGATTAA TTTATTCATT 900
GTATATGAGT GCACTGTAGC TGTCTTCAGA CACACCAGAA GAGGGCATCA AATCCCATTA 960
CAGATGTTTG TGAGCCACCA TGTGGTTGTT GGGAATTGAA CTTAGGACCT CCAGAAGTCT 1020
GGAAGAGCAG TCAATGCTCT TAACTGCAGC TAAGCTATCT CTTTAGCCTC TTTTTTTTTT 1080
TTTTTTTTTT TTTTTTTTTT TTTTTGGTTT TTTGAGACAG GGTTTCTCTG TGTAGCCCTG 1140
GCTGTCCTGG AACTCACTCT GTAGACCAGG CTGGCCGTGA ACTCAGAAAT CCACCTGCCT 1200
CTGCCTCCCA AGTGCTGGGA CTAAAGGTGT GCGCCACCAC GCCCAGCTCT CTAGCCTCTT 1260
TTTACTTTTT ATAGTCTTTC TAGAAGGCCA AAGAGATGGC CCAGTAGTTG GGGCACTGAT 1320
TGTTCTTCTA GGGGACACAG GCTTGATTTT CAGCACTCAC ATAGTGACTC ACACTGCTTG 1380
CAACTGCAGT TCTGTGAACC TGGTGCCCTA CCTGGCCTCC ATGAGTACCA GGCATATAAA 1440
TACTGTATAG AGATATATGC AAGCAAATAC TCACATACAC TTTAAACTGT ATAAACATGT 1500
ATAAACTGGA TGGTAATGGT GCACACCTTT AATCCCAGCG CTTGGGAGGC AGATGCAGGT 1560
GGATGTCTAT GAGTTAAAGG CTAGCCTGGT CTTCAGAGCA AGTTCCAGAG AAGCCAGGGC 1620
TACACAGAGA AACTATGTCT TGAAAAACAA ACAAACAAAA TATATGTATA AAGTCTTGCT 1680
AAGTTGCCCG GGCCTTAAGC TTTCCATCCT CCTGCCTCAT TTTCCCAGGC ACTTGGGATG 1740
ACAGGCCTGT CTACCAGCCT AGCTGATGTG TAGCATGTCA GACTTGCCTA ATTCTATAGG 1800
GTAGTACTGG CCTGTCCTGA TGGTGGCTGT GAGCACACAT GGGTTGCAGG TGCCCACCAG 1860
CACCCAACAG AGACATGGTC AGTAGCCGCT ATGAGCACTG TGATGCGACC AGCCATCAGG 1920
TGGCAGGGAA TCACATAGAA GGGCCGCCCT GCCCTCCCAT 1960