EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM028-11679

Organism

Mus musculus

Tissue/cell

Cerebellum

Coordinate

chr16:4709930-4711310

Target genes

Number: 23
Name	Ensembl ID

Srl	ENSMUSG00000022519
Tfap4	ENSMUSG00000005718
Glis2	ENSMUSG00000014303
Pam16	ENSMUSG00000014301
Vasn	ENSMUSG00000039646
Dnaja3	ENSMUSG00000004069
Coro7	ENSMUSG00000039637
Nmral1	ENSMUSG00000063445
Hmox2	ENSMUSG00000004070
Gm15859	ENSMUSG00000086944
Gm15835	ENSMUSG00000086464
5730403B10Rik	ENSMUSG00000004071
Fam100a	ENSMUSG00000039568
Mgrn1	ENSMUSG00000022517
Nudt16l1	ENSMUSG00000022516
Gm16861	ENSMUSG00000086456
Anks3	ENSMUSG00000022515
4930451G09Rik	ENSMUSG00000022543
Rogdi	ENSMUSG00000022540
Glyr1	ENSMUSG00000022536
Ubn1	ENSMUSG00000039473
U6	ENSMUSG00000077367
Sec14l5	ENSMUSG00000091712

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Gfi1b	MA0483.1	chr16:4710452-4710463	AAATCTCAGCA	+	6.32
Myod1	MA0499.1	chr16:4711258-4711271	TGCAGCTGCCCCT	+	6.22
Nr5a2	MA0505.1	chr16:4709947-4709962	GAGTTCAAGGACATC	+	6.49

Enhancer Sequence

GAGGCAGGCA GTTCTCAGAG TTCAAGGACA TCCTGGCCTA CAGGGCAAGT TCCAGGGCAG 60
CCACAGCTAT ACACACACAC ACACACACAC ACACACACAC ACACACACAA AGGACAAAAG 120
TTTCCTCAAG GTAGACAGCA TAGCTTTAGT CTGTTTATCC CATATTTTAG GGTATGACAC 180
AGTAAATCGT TCCTCAGCCA AGAGTCCATG GTAGATGAAC CTGATGGAAC CACTGTTCCT 240
TTCCCTGCTA GAGGAGTCTG ATGTTAGGAA TGGACAGCAA AAAGATAGTG TGCTAATGGT 300
TAGAAAAACC CAGGGGCTGG AGAGATGGCT CAGTGGTTAA GAGCACTGAC TGTTCTTCCA 360
GAGGTCCTGA GCTCAATTCC CAGCAACCAC AGATCTGATG CCCTCTTCTG GTGTGTCTGA 420
AGACAGCGAT AGTGTACTCA CATACAAAAA ATAAATAAAT CTTTAAAAAA AACAACCAAA 480
AAACAAACCC ATACACAGGT TGAAGTTCAC AGAGGTATCA TGAAATCTCA GCAAGTGACT 540
TGGGTTTTCT GGGCCTTTGT TACTCCCTCT GAAAAGCTTA GAGCTAAGTT GACCTATCGT 600
GCAAGTCTTA GCCACAGGCA CCATTACCTC AAGTCCATGG CTCTGCCACA TCTTTGTTTG 660
TTCAATTTTA ATCCGCCTCA AGCAGCACAG TAGCAGGGCC TAACCTCCAC GCTGCTGCAA 720
TCACCTCCCA CCCAGAACTC CGAGTTACTA CTTACTAGTT TCTGTGTCCA TCTTGGCTGC 780
TCTTGACCCA ACTGAGCAGC CCTCTGGGCC GCATTCTCTT GGCTCCTTTA TGTGATGGCT 840
CTGGTTTCTC CCTCCTTCCC TCCTGCACAC CCTCCTAAGG CATGGCTCCT CTCTTCTCCT 900
TCCTCAGAGT CCCAAGCCCA GACACCTAAA CCCCACCTCT CTCTTCTTCG CAGCTATTGG 960
CTGCTGGCAT CTTTATTTAC CAGTCAGAAT TAACTGAAGG CAGGTTCCCA GAAGCTCCTT 1020
GCAGACTCCA AATCTTGGAG GCCAGCACTT AGCGCTAGAA TACAAGTAGT GTTAGGCCTA 1080
CCTACTACAG TTAGTCTTCC GTCAACAATT TAGAGTGAAT GCACAGGTGG CCTCAGTGCC 1140
TGTGGTCCTG CCTGCCTGGG GGTATTCAGG GGTGTCAAAC ACTCAGGGGT GTTGCCTCCC 1200
AGTGCATGCA CAATGCTCAG GGTTGAGAGT CGAGTAAGTA CTTCATGACT TTAAACACAC 1260
CAAGTAAGCC TGCGCCTCCT ATTCCAGTTT TGTTGGTTTT GTTTGTGTGG TCTCAGGGCC 1320
CATTTTCATG CAGCTGCCCC TCCAGCTCAC TTCCCACAGA CAGAGGCCTT TTCTTTTGGG 1380