EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM028-10800

Organism

Mus musculus

Tissue/cell

Cerebellum

Coordinate

chr15:78416800-78417470

Target genes

Number: 17
Name	Ensembl ID

Txn2	ENSMUSG00000005354
Cacng2	ENSMUSG00000019146
Pvalb	ENSMUSG00000005716
Tst	ENSMUSG00000044986
Mpst	ENSMUSG00000071711
Kctd17	ENSMUSG00000033287
Tmprss6	ENSMUSG00000016942
C1qtnf6	ENSMUSG00000022440
Sstr3	ENSMUSG00000044933
Gm6723	ENSMUSG00000068226
Rac2	ENSMUSG00000033220
Elfn2	ENSMUSG00000043460
Mfng	ENSMUSG00000018169
Card10	ENSMUSG00000033170
Lgals2	ENSMUSG00000043501
Pdxp	ENSMUSG00000068221
H1f0	ENSMUSG00000048769

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

CTCF	MA0139.1	chr15:78416847-78416866	CGCTGCCACCTGGAGGCTG	-	6.45
STAT1	MA0137.3	chr15:78417224-78417235	TTTCCTGGAAA	-	6.62

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_01325

chr15:78252907-78454245

Th_Cells

Enhancer Sequence

CCAAGGCATA ACTAGGAAAG GAACAAAAGG GGTGAAACCA CCCCTCCCGC TGCCACCTGG 60
AGGCTGGATG TTGCAGCCAC CATCACCTCT GTCAATCATC CCTCAGAAAG CATGTGCCAT 120
GGTGCCCAGT GTTCTGCCTA CTCTCACCTC TTCTCCACAC TCATAGACCA GCATCTGCTG 180
CCAAAAGCAG CCAGAGCGCC ACTGTGTGCC ACACAACCCA TCCAGAGCCA TAGCTGCAAG 240
GGATCCGGGA CACAGCCTTG GGACTGCCTA TGAAGGTCTT GGCCACACAA CCCAGGGTGA 300
CCTTCTTTAA ACTGGAGCCC ACAGTTAGCC ACAGTGCTCT CCCCACAGCA CTCCCTGGCT 360
GTGTAACTCA GGGAGAATCA CAGAACCTCT CTCAGGCCCA GCCTCGCTCA CAGACCCGTA 420
GGGGTTTCCT GGAAAGTGAT TCCGAGACAT TGGTGTCAAA GCCAGCACCT CTCTGAAAAT 480
CTGGCCTGAG AGATTTCCTG ACAAGGCAAG TCCTTTGTCT GCCAGTCAGA GGAAACAAGT 540
GGTGTAAGCA GGCCCTGATG TCTGGCCTCT CAGCCCCCTT CCCTTTTGAG ACTTGTTCCT 600
CCCACATTCT ACCCCTGCCC CCAGCCTCAA ACACACACAC TCAAGCCACA GGCACATACT 660
GACCACACCC 670