EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM028-06622

Organism

Mus musculus

Tissue/cell

Cerebellum

Coordinate

chr11:119086380-119089700

Target genes

Number: 14
Name	Ensembl ID

Gm11749	ENSMUSG00000084887
Rbfox3	ENSMUSG00000025576
Cbx2	ENSMUSG00000025577
Gm17569	ENSMUSG00000090591
Gm11753	ENSMUSG00000085548
Tbc1d16	ENSMUSG00000039976
Ccdc40	ENSMUSG00000039963
Gaa	ENSMUSG00000025579
Eif4a3	ENSMUSG00000025580
Card14	ENSMUSG00000013483
Sgsh	ENSMUSG00000005043
Slc26a11	ENSMUSG00000039908
Rnf213	ENSMUSG00000070327
Nptx1	ENSMUSG00000025582

TF binding sites/motifs

Number: 14

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3	MA0041.1	chr11:119086698-119086710	AAACAAACAAAC	-	6.32
Foxd3	MA0041.1	chr11:119086702-119086714	AAACAAACAAAC	-	6.32
Foxd3	MA0041.1	chr11:119088629-119088641	AAACAAACAAAC	-	6.32
JUN	MA0488.1	chr11:119088219-119088232	GTGACATCATCTT	-	6.2
PLAG1	MA0163.1	chr11:119089278-119089292	CCCCCTAGTGCCCC	-	6.15
ZIC1	MA0696.1	chr11:119087550-119087564	CACAGCGGGTGGTC	-	7.08
ZIC3	MA0697.1	chr11:119087549-119087564	CCACAGCGGGTGGTC	-	6.2
ZIC4	MA0751.1	chr11:119087549-119087564	CCACAGCGGGTGGTC	-	6.28
ZNF740	MA0753.2	chr11:119088611-119088624	GGGGGGGGGGGGG	-	6.03
ZNF740	MA0753.2	chr11:119088612-119088625	GGGGGGGGGGGGG	-	6.03
ZNF740	MA0753.2	chr11:119088613-119088626	GGGGGGGGGGGGG	-	6.03
ZNF740	MA0753.2	chr11:119088609-119088622	ATGGGGGGGGGGG	-	6.07
ZNF740	MA0753.2	chr11:119088140-119088153	CCGCCCCCCCCCC	+	6.64
ZNF740	MA0753.2	chr11:119088144-119088157	CCCCCCCCCCCAC	+	6.92

Enhancer Sequence

TGAATGGGTG ATGGCCTGAA GTTACTATCA TCTGAAGTGA AAGATTCCGT CTTGTCTCTT 60
TAGAGTTCTG GGCGCGTCCA CTAAGGGTGG CACTCTGCCC AGGCTCGGGC TTCTCCCCTA 120
CCCAAAGTCT CAGTTACATC AATACCCCAC AACTGCAATC AAATGATGTA CAATATGACA 180
GACATCAATA AAGTCAGCTC TCCTGCTACA AACCTTCATG TTTAGCAGCT CCCCTCCCCT 240
GTACCTGAAG CTTGTATCAA TCTACACAGC CAATCTTACA AGAGCAGAAT CCAGCCTGTG 300
AAAGAATTTA AAAAACAAAA ACAAACAAAC AAACCTCAGA CGTAGGGAGG GATGAGCTAG 360
AATCTTAGAG ATCTGTGTTG CCAGGTAACC TGACCAACCC TGCTCCCCAG AACAGCCTGA 420
GGGAGTTCAG TCCCCACCAA GTTACAAAGA CTGGAGTGTG GCAATAACTC ATGGTATCTG 480
GCCTGTAATC TCAGCTACCC AGAGGGCAGA GGCAGGAAGA TGGCAACTTT AAGGCCTGCC 540
ACGGCTCCAC AGTGAGCCCA AGGAACACCT TCACAAATCC ACGGGCTTCG AGGAAGAGCC 600
CCTGCCTAGC AAGCGTGAGA TCAAGCCCAT GTCCAGTCTC TGGCATTGCA AAAGAAAATA 660
AGTCCAAATA TGATCAACTT TCCACCCAAT AAACCATCCA CACGAAGAGT CAACACTGAA 720
AACAGCTGCG TGGGGTTGGC AGAGCCCTGA CCCAGGACCC CTGCTGCTCG CTCTCAGCCT 780
CACAGAAGTT CCAGTGTTGT AGCGGTCTCT TCAGCAAACT GCAATAAAGA GACTGCGCCC 840
TCAGCCCTCA GCCTTACCAG CCCCCACTGT ACACCAGGCT CAGGGAGCAC CTCAGAGGAA 900
GGGGAGCACT GCAGAGGAGG GGGAGCACTA TAGAGGGGGA GGCAGGAAGG ACGTAAGAGC 960
CAGGGGATGG GGAGGATTGC TATGAACGGA TGACATCCGG ACAGGACACT AACTCACAGC 1020
CACAGCTGTG GCTACCTGTG TAACGCCTGC ACAAGAGCAA ACCAGTCAGC CTCCAGCTAG 1080
GAGAGAAGGC AGTCCACAGA TCCCACCTCT TACTGAGGAG AGGGCAGTTG TCAGCTGCTG 1140
GAGGAGAGAA CACTTGTAGG TTTCCCATGC CACAGCGGGT GGTCCCACAC ATATGCACTC 1200
GTGGGCAATG GAAGCACACA TCTGCAATCC CAGCACTTAC GATGCAGGGG CAGGGGAATT 1260
ACTATGAGTT CTAGACCAGC CTAGGCTGCA GAAGTGGGGA GAGAGAGACT GAGTCTCAAC 1320
AAAAAGTTAC TTGCTGTCTG CCAGACACTT GGGCGGTGAG GTTTTGAAGA GGAACCAAGG 1380
AACAAGGAAC CCAACGAGAG CCAGTGACTG GTGTATACTG TCTATTTTTG GAGACCATAC 1440
AGGGTTTTTT GGGGGTTTGG TTTGATTTGG TTCTTTGAGA AAGAATCTAC GTACCCCAGG 1500
ATGGCCTAAA GCTCACGCTA TAGCCCAGGC TGGCCTTAAA TGCACAGAAA TCCCCCTGTC 1560
TCATCTTCCC AGGCACTAGA ATTGCAGTCC TGAGCCACCA TGCCTAGGGA AGATGATTTT 1620
ATCACTGAAG TTTGTCACTC AAAATCAGGG CACAGAGAGG CCAGGACAGT AGTGGGGAGT 1680
TCTGTCAGCC CAAAGGCCAT CCTCTCAAAG GGGGAAGCTC CAAAGCAAAG AGTGCTCCTC 1740
GGGAAGCAAG GACCTCCCAG CCGCCCCCCC CCCCCACCCC TTAACAAAGC CCTGTGAAGA 1800
GCAGGCCAGC CAAGTCTGTG CTGGGTCACA TGGCATCATG TGACATCATC TTGGGGTAAA 1860
TGTGAGTAAA ATAGTTCTGT GGATAAAGGT GACTGCTGCC ACCAAGCCAG AGGGCCTGGG 1920
TTTGAGTCCT CTCAAGACTC ATGTGGTGGG AAGACAGAAC TAAGCTCCAC AAGCTGTCCT 1980
CTGAGCTCCA TACAGGCACC ACCAAGACAC ATGTGGGCAC ACACACCCCA CACAATAAAT 2040
AGTCATAATA AAAAATGTGG TTTTGAAAGC TTATAAACTG CAGCTCTTTC ACGGGCCTGT 2100
TTTCGCACAA CGAAAACCCA CACATGGTGA TCCGAGGCTG TTAACAGACA CCGTGATTGC 2160
CAGGAGAGTC AACAGTTCCC AAGAAGAACT TCCTAGCTAT ACTCAAGACA TTCCACTCAC 2220
CAGAAAGCTA TGGGGGGGGG GGGGGGACAA AACAAACAAA CAGAGAAAAA ACCCATAAGT 2280
ACTGCTCAGC TAAGAGATCC ATCCCCAGCA ACCAGCTAAG AACCAACTCT GGTAAATTCC 2340
CAATGGGTGA ATCTTAGCCG GCCCCTGTGC CCAAAGTCAC CGCACCACTA AGTTCAATAT 2400
TCGCTATCAA GGTTAATGTC AATATTTCTT CCAAGAGCTA CATACATAGT TTCTTTTAAA 2460
TTCTTTGATC AGTTATTAAG ATTTAGAGTG GAGCCCCTAG TCCCCGGCTC TTTGCACCCA 2520
TGTTCTGACC AGTATGCTTG GTGACAGGAC ACTTCCCCTC TCTCTCTCTT TCCTGATAAA 2580
GGAAGTTGAC AGAGTCCATG GAACAAACTT TAACAGAGTC AAGAGACGCT TTTCTATTCC 2640
CCTATTTCTG AACGGAACCT GGACTAGATT GTGGCCAACA TGTGACACCG ACTTCGGAGG 2700
AACAGGCTTT TCTCACCGCG CGTTCTGGCA GGGTTCCGTG GGTTATTTTT AGCAATCTTA 2760
AATTGCCCTT TTTTCTTTTT ATACTATCCC TTTTTTTCTT TCTTTCTTTT GAGGAAAGAG 2820
AGAGAGAGAG AGAGGCGCGC AGGCTAAAAA AGAAGCGAGG ATCCTGACAT GGGGCCTCTT 2880
AAATAGCCCT GACCATTTCC CCCTAGTGCC CCAACGCTAA GACCGCACAC GCCCCAGGAG 2940
GGCATGGCAC ACCTTGGGGG CTCTGTCTGA CAGTGCAGGA ACCCCATAAG TTCTTCGCAT 3000
GCTCAGACCA GCCAGCAAGA CAAAGACCGC AAGTGCCCCG GCCCACAGCT CCAGACAGGC 3060
GAGGACCGAG TCTCCTCGAG TGGGCCCACT CCCAAAGCAG AGAGTCTCAC TCGAGGGTGG 3120
AGTTCCCAGG GCGTCCCCAG CAAGATCCGG GTTCCTCCGC ATCGCCCCCG CCCAGAGCCC 3180
AGAGCCGGTC CCCCAGCCAC TCCCGGACCC CCGCGCAGCA GGCCCGGGTC CGGTGCGTGC 3240
AGATTCCAGG GTACCCAGGA ACCGCCACGT CGTCCCGAGT GGACCCCAAA ATCCCCGGCC 3300
CGCGATCCCA GAAGAACCCT 3320