EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM028-05998

Organism

Mus musculus

Tissue/cell

Cerebellum

Coordinate

chr11:102678610-102680280

Target genes

Number: 17
Name	Ensembl ID

Rundc3a	ENSMUSG00000006575
Gpatch8	ENSMUSG00000034621
Gm1564	ENSMUSG00000051455
Ccdc43	ENSMUSG00000020925
Gm11637	ENSMUSG00000084375
Adam11	ENSMUSG00000020926
Gjc1	ENSMUSG00000034520
Higd1b	ENSMUSG00000020928
Gm17536	ENSMUSG00000091056
Eftud2	ENSMUSG00000020929
Gfap	ENSMUSG00000020932
C1ql1	ENSMUSG00000045532
2410004I01Rik	ENSMUSG00000085338
Nmt1	ENSMUSG00000020936
Dcakd	ENSMUSG00000020935
Plcd3	ENSMUSG00000020937
Acbd4	ENSMUSG00000056938

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Crx	MA0467.1	chr11:102679217-102679228	TTAATCCTCTT	-	6.14
E2F6	MA0471.1	chr11:102680171-102680182	CCTTCCCGCCC	-	6.62
GFI1	MA0038.2	chr11:102679664-102679676	CCAATCACAGCA	+	6.02
TEAD1	MA0090.2	chr11:102678681-102678691	CACATTCCAT	+	6.02
TEAD4	MA0809.1	chr11:102678681-102678691	CACATTCCAT	+	6.02

Enhancer Sequence

AATAACATTA AAAAGTAAAA TGTAATCTTT AATGAGATCA TCTCACTGTT GTAGGAAACA 60
CTTTGGTTAA ACACATTCCA TGGGTCTGTA AGCTAACCCT TTGCCAAGGT GTACTGAGAG 120
CCAACTCCAG ACTTTGTAAA ACAAGAATTT ACTGCTTGTA TGTGAGCCAG TATTCAATAC 180
CTCCTCATCC ATTCTTTAGC AAAGGAACAG AACTAATAGG ATGAAACCAA TGTTTTGGAA 240
CCATAACACA TCAGAACACA TTTGCAGAAC TTATAATGCC AGTTTTCTCT CCAAAACGCC 300
CTTTGCCTAC TCTGCACCCG AAGATCTGGC ATCACAAATC GTTTTACCCT TTACCCCGAA 360
GACTGTTCTA ATTCCTTTCA TTCTGCCATT ACACAGCCCT TAAGAAACTC AAAGTAGCTG 420
CAAATAAATC CTGCTGGCCC CAAACAAAAC CTGCAATTTT TAACAAAAAC TCACAATTAA 480
TTTAGTTACA AGCTAAGCAA TCAAATTCGT GGGGCCTTTT TTGTTTCTCT TTGTTTTGCA 540
TTTTTTGCTC TGAAAAATAC CTGCAAACTG TTTACAAGGG GGAAGGATTA ATCCCCAAAT 600
TACATTATTA ATCCTCTTCC TACAGTTACT CATGTACTAC AGACAAAATG ATTTCTGCCT 660
AACAGAACTA AAGTCTTTCG TTTACAAGGC TTTTTGTACA GCGCTTTCAC ATATATCCAC 720
TTGTAAGGGT GCACAACAAA AGCAATAACT TTTAGACTTA AGACACATAC AAGATAACTT 780
ATCCAGAATT TGGTCTACCT TGAGTTCCTC GATTGCACCT AGTGTGGACG AGAACAAAAT 840
AAAGCCCGAG CACAATGAAA TCTGTGGCGT TGCCAGTCCC CGAGGACCAA AAGGAAAATG 900
TCTTCAAATG ACAAAAACCA AACTCATCCC ACTTCGCAAA AGAAAAGCAA TCCCAAATAA 960
TCCGCAAAGC GGGGACCGGC GGGGGAGGAC CCCAAATTCT AAACATGGGT CATGTAAATC 1020
TTTTCAACTC GAAACTCCAA ACGCGGCAGC CAGCCCAATC ACAGCATTAG CGCCTCCTCT 1080
CTATTTTCAA TCTGGAGACT CAACGAAGAA CAATTAAAAA AAAAAAAAAA AAGGCCACAG 1140
CAGAGCTCCA AAGTTTTCCG AAGTGAGAAT AAAGTCATCT CAAGTAAAGA AAAGGCGTCC 1200
AGCAAGAGGC GACGGGCCGG GTCCTCCCGC CAGCCCCTCT CCCGCTCCGC AGCGCTCGAA 1260
CCAAACCTCC AGTAAAAAAG GGGGGAAAAA GAAACCTCCG AGGGGGACAG AGGACCCGCC 1320
GGAGCCCGCA GCACGCCGCC GAAGAGCGGC CCAGGCCGTC AGACAAAGAC GAGCCCGCCC 1380
AGCGCCAGCC CGGCCGGGTC CCCCAACCGC CCCGAGGAGT TGCGGGAGCA CCGCCGCCCG 1440
CTCCCGGCCC GCCCGAGCCG TTTCCCTCCC AATTTGGGAA CCGCGCGCCT GGGGACAAAG 1500
AGGGCGGGCG CGCCGGCGGC GGGACGCGGG TGGCGACGCC CCTCGGGGCT CGGCGGGCGC 1560
TCCTTCCCGC CCTGCCGCCC CCAGGAACCC GGCCCGCCGC CGCCGCCGCT TTCGAGGCGC 1620
CTCAGAGTTC GCCCGGCCGC GCCCGGCCCG GGGCCCCTCA AGCCGCCGCT 1670