EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM028-04395

Organism

Mus musculus

Tissue/cell

Cerebellum

Coordinate

chr11:60680390-60681800

Target genes

Number: 12
Name	Ensembl ID

Smcr7	ENSMUSG00000018599
Top3a	ENSMUSG00000002814
Smcr8	ENSMUSG00000049323
Shmt1	ENSMUSG00000020534
Gm12611	ENSMUSG00000081578
Dhrs7b	ENSMUSG00000042569
Gm17432	ENSMUSG00000091753
Tmem11	ENSMUSG00000043284
Gm16515	ENSMUSG00000018931
Gm16516	ENSMUSG00000042549
Map2k3	ENSMUSG00000018932
Kcnj12	ENSMUSG00000042529

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Nkx2-5(var.2)	MA0503.1	chr11:60681068-60681079	CTTGAGTGGTT	-	6.32
ZNF740	MA0753.2	chr11:60681745-60681758	CCCCCCCCCCCAC	+	6.92

Enhancer Sequence

TATGTCTTGC TGTTTGTCAG GAGAAATGAG TGAGCATAGT TTGAGACATG TTTGGAAAGG 60
GAGGCCAGCG CATAAAGTGG AGTGACATGG AACAGACACA GCCAGGGAAG AGGTCTGCGT 120
CAGAGGTCAC AACTCTCAGG TCCTCACTGC AGGCTGTTCT ATGAACATCA GAGCAGTGTT 180
ACAGCAGCCA CAAACCCAGG TGTGCCTATG TTCCTGAGCT GGTTCTGTAG ATGCGCTCAC 240
CACAATCCTT TCCTACGCAC TACAGACCTG GTCCAACCAT ACAGCATGAA AACCAAAGCA 300
AGCAACAGAG GAAGCACGAG TGCCACACAG GAGGTCTCTC AAGTTCACAG GTAAGACAGC 360
ACAGGTATAC ACCATGGATA CCAGAGACAC CAATTCTTTG GGGACTGCTA GTTAAGAAAA 420
ATAGTCCTGA GTCTCCTTTG GGATGGTAGA ATCTTTAGAG AAGCGTACTT CCAGATAGAA 480
AATGGAAACA CTCGAACCAA ACATCCATGA AGCACAAGTC CCCTTGGGTC AGACAAGGTG 540
TAGGCATACT AAGCACTGGT AGGAGGGAGT CCTGCATGCC ATGGCATGTG TGGGTTCTGA 600
AGGGTCTTAT CTACTTCAGT AAATGGTGCT CAACTCCCCA GGAAAGAGCC AAGTCCAGCC 660
ATCTCTCAGC CACTCCAGCT TGAGTGGTTG GCTTTTATGT CTGAGTCAAA TCCCAGCCAA 720
AAAAGCCAGC CAAAAGCTTG GTTTCCACAC CAGTGGAAAA TGGAAGTAGG ACAAGTGATG 780
GGCAGGAGCT GGCCCCGACT GAGTAAGCCC TGGGCCTTAA TTCTAGGTGA TCTGACCATT 840
GGTGAACAGA ATAAACCAAT GACGACTGCT GCTACTTGGC CGAGGATCCC TCATCAGAAC 900
TGCTGAAGAA CAGTGTAGTG TGCTTCTGGA CTTTGGATGT ATTCAGATTG GAGAAGAGTC 960
AACAGACAAG AAGATGTCAT GGGGATATAC CCCAAATGTG AAGTCCAGTT CAGTGTGTCC 1020
TTGCTTTACA CACGCTGCGC TGGCTAGTTT TATGTCAACT CAATGCAAGC CAGAGTCATC 1080
TGAAAAGGAG AGAATCTCAG TTGGGAAAAT GCCTCCGTAA GCTCCAGCTC CTGCAGTTTC 1140
TTAGTGATTG ATGGGGGGAA CCACAGCCAG TTGTGGGTGG TTCCATCCCT GGACTGCTGC 1200
TCCTATGTCC TGTAAGAGAG TTCGCTGACG TGGATGCCTG AGGCCCATGC TCCTACTGAC 1260
TGACTCGACT AACTGGATGT GACTGTTGCC ATGGTACTGA CGCCTGCAGA CTCACAGTTG 1320
AGAGGGACAT AGAAGGCTTC TGTAACAACC CCGACCCCCC CCCCCCACAC ACACAAAGTG 1380
ACTGAAAGCC ATTTAATTAA GAATTCTTAA 1410