EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM028-03801

Organism

Mus musculus

Tissue/cell

Cerebellum

Coordinate

chr11:6342960-6344330

Target genes

Number: 18
Name	Ensembl ID

Camk2b	ENSMUSG00000057897
Gm11969	ENSMUSG00000083209
Nudcd3	ENSMUSG00000053838
Npc1l1	ENSMUSG00000020447
Ddx56	ENSMUSG00000004393
n	ENSMUSG00000077524
Tmed4	ENSMUSG00000004394
Ogdh	ENSMUSG00000020456
Zmiz2	ENSMUSG00000041164
Ppia	ENSMUSG00000071866
Purb	ENSMUSG00000049647
Gm11974	ENSMUSG00000085156
Ccm2	ENSMUSG00000000378
Nacad	ENSMUSG00000041073
SNORA5	ENSMUSG00000064495
Snora5c	ENSMUSG00000065686
Tbrg4	ENSMUSG00000000384
Ramp3	ENSMUSG00000041046

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

HLF	MA0043.2	chr11:6344094-6344106	CATTACGTAACC	+	7.22
IRF1	MA0050.2	chr11:6343035-6343056	AAAAAAAAAAAGAAAGAAAGA	-	6.25
TEF	MA0843.1	chr11:6344094-6344106	CATTACGTAACC	+	6.44
ZIC1	MA0696.1	chr11:6344082-6344096	CTCAGCGGGGGGCA	-	6.41

Enhancer Sequence

GTCTACAAAG TGAGTTCCAG GACAGCCAGG GCTATATACA GAGAAACCCT GTCTCGAAAA 60
ACCAAAAACC GAAAAAAAAA AAAAAAGAAA GAAAGAAAAA GAAAAAAAAA AAAAACCCAA 120
AAATAAAGTA CCTATCATGT GAAAATGTAG ATGAAACACA AAGTAATAAA ACTGATGTTA 180
CAATGGATTT AGTAATAGAT TTGCTCAGGA AACATTGGCC CAAGTGAAAT TTAGCTAAAG 240
GTGGACCGCC TCTCAAACCC CTCGAAGATA AGCAGTATGC TAAGCAGGCC TGCAAATTAA 300
AAACATGGAA CTTAGGATGT TAGGAGACAA CTGTTCACCA GGATGGGCCA CCCAATCAGA 360
CTCATTCCCG TGACAAAGGA GACAGAACTG ATCTATGACC AGCAGTTAGG CCCAGATAAA 420
GATAAACCAG CTTGTAATTC TGCAAGGTAG GTATGATGAC CCTCGGTAAT AACTTTGAAA 480
AAGAACAGTG GCATACTTAA AAATACTCCT AGCCATATGT AGTAATATGT ATAAATCTAT 540
CCACTTCAGC GGTCAGACTT GCAATCTCCT GTCTCTGCTT AAATTGTTCA AAGTGTAACC 600
TGGGACCTCA AAAGAGATGT CAGGATAACA GAGTCTGTGG AATGCACACA TCTAAAATGT 660
ACATAAATTA GTAAGCTCTT CAGTTGGAGG CAGGCTCTTG CTTGAGTCTT AGCCCAGCCA 720
GACAAGCGTC AAAGAAAAGA TAAAGAGCTT TTCCTTAACT AATCTCTAAG TGCATGCAGA 780
GAGTCCTTCT TGGGAAGGCT TACTATTTCT ATAACAGCGA AAGCATATTT CAAGCAGGAT 840
ACCGACAGAA ATATAATTCC AAAAAGAGAG CGTCACTCCC CTTAATCTTG GTGAAACACA 900
TAGGTCTCGA TTGGTTTTAG GACTTTCCCC TCAATTTCAG AATGGGGCTA AAGTTTTACT 960
CACTTTCTTT CTTTAGAAGT CACTTTCAAC TAGATCTAAA CTACAGAATG AAAAGATACT 1020
TTAAGATGAA GCCAAGTAAA TAAACTTCTA TTCCAAAGAA TAACCGGCAA GCCGCTGACG 1080
AGGCGAGCGG TTCTGGTGGG CAGGATCAGA ACTCCTCCGA TCCTCAGCGG GGGGCATTAC 1140
GTAACCCTGA GCCGAAGCCT CAGAACTCGC AGGGCTACAG CCGGACCTCC TCTGTGCGGC 1200
GCAGCACCCG CCCCCCTGCT TCTGCCTCCC GCGTCCGGCG CGCCCCCCCA ACCCCCGGCG 1260
GAGTCCGGAA CAGCGGGCAC TCCGGCTCCG AAGCGCGACA CCGCCCACTC CCGATCCCCC 1320
AGGTGGAGCA GCCGTCCGGG GCTTCTGCGC GCCCACTCCA CGCGCGACCC 1370