EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM028-03782

Organism

Mus musculus

Tissue/cell

Cerebellum

Coordinate

chr11:6173460-6173740

Target genes

Number: 22
Name	Ensembl ID

Xbp1	ENSMUSG00000020484
Pgam2	ENSMUSG00000020475
Polm	ENSMUSG00000020474
Gck	ENSMUSG00000041798
Ykt6	ENSMUSG00000002741
Camk2b	ENSMUSG00000057897
Gm11969	ENSMUSG00000083209
Nudcd3	ENSMUSG00000053838
Npc1l1	ENSMUSG00000020447
Gm11401	ENSMUSG00000081153
Ddx56	ENSMUSG00000004393
Tmed4	ENSMUSG00000004394
Ogdh	ENSMUSG00000020456
Zmiz2	ENSMUSG00000041164
Ppia	ENSMUSG00000071866
H2afv	ENSMUSG00000041126
Purb	ENSMUSG00000049647
Gm11974	ENSMUSG00000085156
Ccm2	ENSMUSG00000000378
Nacad	ENSMUSG00000041073
SNORA5	ENSMUSG00000064495
Snora5c	ENSMUSG00000065686

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RXRB	MA0855.1	chr11:6173700-6173714	GGGTTTAAAGGTCA	+	6.73
RXRG	MA0856.1	chr11:6173700-6173714	GGGTTTAAAGGTCA	+	6.74
Rxra	MA0512.2	chr11:6173700-6173714	GGGTTTAAAGGTCA	+	6.71

Enhancer Sequence

TATAATATAG TCATTAAAAT AAATATAATA CATTTTATAT ACGGATATAT AATACAGACA 60
CACACACATG ACTGGAGGTG TGGCTCAATG GTAGAGAGCT TGCCTAACGT CCAACCCTGC 120
CACTGTAGAC ATATACAGAA ATCGAGGAAA GAAAAGCAAA CCCAAACCTC ACCTATGTAG 180
ACTGACTGGT AACTCCCACA TTCCCGAGTA GAGAAGTCCC CAGCAGCCAC GTTGCACAGT 240
GGGTTTAAAG GTCAAGTACA GCCTCCAAGT TCAAGTCCCT 280