EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM028-02767

Organism

Mus musculus

Tissue/cell

Cerebellum

Coordinate

chr10:80228980-80230610

Target genes

Number: 24
Name	Ensembl ID

Uqcr11	ENSMUSG00000020163
Klf16	ENSMUSG00000035397
Fam108a	ENSMUSG00000003346
Scamp4	ENSMUSG00000078441
Csnk1g2	ENSMUSG00000003345
Btbd2	ENSMUSG00000003344
Mknk2	ENSMUSG00000020190
Gm17306	ENSMUSG00000091778
Mob3a	ENSMUSG00000003348
Izumo4	ENSMUSG00000055862
Ap3d1	ENSMUSG00000020198
Gm17151	ENSMUSG00000075558
Sf3a2	ENSMUSG00000020211
Plekhj1	ENSMUSG00000035278
Amh	ENSMUSG00000035262
Oaz1	ENSMUSG00000035242
Lingo3	ENSMUSG00000051067
Lmnb2	ENSMUSG00000062075
Gadd45b	ENSMUSG00000015312
Gng7	ENSMUSG00000048240
Diras1	ENSMUSG00000043670
Slc39a3	ENSMUSG00000046822
Sgta	ENSMUSG00000004937
Eef2	ENSMUSG00000034994

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Myog	MA0500.1	chr10:80229855-80229866	CTGCAGCTGTC	-	6.62
Nr2f6	MA0677.1	chr10:80229409-80229423	TGACCTATGACCTG	-	6.56
RXRG	MA0856.1	chr10:80229409-80229423	TGACCTATGACCTG	-	6.22
Rxra	MA0512.2	chr10:80229409-80229423	TGACCTATGACCTG	-	6.06
Tcf12	MA0521.1	chr10:80229855-80229866	CTGCAGCTGTC	-	6.14

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_01224	chr10:80204770-80237839	Th_Cells
mSE_11895	chr10:80228382-80229961	Placenta

Enhancer Sequence

AGGTGAGCAG GAAGGGATGG AGCAGGCTGT GGGCTGCACC TACCCCGCTG CCTACACCCT 60
TGCTACGCTT CCTTCGGGAA GCTCTTTTGG TAGAAGAGTG TATCTGGCTG GAGGAGTGAG 120
GCAATCACTG GGAACTCCTA CACTGTACAC ATTGAATTGA TATGTGGGAA ATTACCAGGG 180
CTGGTGAGAG AGCTACTGGC CGTTTTAACA GCAGGTCCTG CCAGCGCTAT GTTGATGGGC 240
CTCCACCTTG CCACCATAGG TGCTGGGTGA GGCCAATCCT TGCCCCCACC TAGGTAGGCC 300
TTCTGTGCAG AGTGGGCGGA GAAGCAAAGG CATCCCTGGA ATGCTGCCTG GAGCCAGGTT 360
TGTTTTTCTT TGAGAAAGAA TAGCCCAGGC TCTACCTCCT GCTCAGAGCC TGCCTAAAAA 420
AGCTTTGCTT GACCTATGAC CTGATTATTA GAAAGGATTC CTGCCAGCCT TAGTGACACT 480
GGGACAGGAC AGTCCTACAG TCCACTGGCT GGGCCCCTTG CCCTCTGACT AGCAACTGGG 540
TGTAAGTGGA CTCGAGCTCA CTGCTGACCC AAGGCAGGAG CCTGTGTCCT TATAGAGTTG 600
GAATTAACTT CAGCCCTCTA TCTCACTTCC TCTGTGAAGC TCCTGGACCC CAGGAAACGA 660
CTTTTTTCAT GTGAGGAACC CACCCAGAAC CCTGCAGTGG GACCCTCCAC CCCTCTGGTC 720
GTCGAGTAGG CTTTCTTACC TTACCTGGTG TGACCTCAAA CTCCTGGGGC TCGCATGACC 780
CAAATTCCAA GTAGCTGGGA CTGTAGTTGT GTGTGCCAAC ACCTCGCCCT GCTTTGGCTT 840
TTCCCGGTTC AGGGATGCCA TGCTCTGTTC TGTGGCTGCA GCTGTCCTGG GTTCCTTTTA 900
AGAGAAAGAA AGGTGGGCTG GTGAGATGGC TCAGTGGGTA AGAGCACCCG ACTGCTCTTC 960
TGAAGGTCCG GAGTTCAAAT CCCAGCAACC ACATGGTGGC TCACAACCAT CTGTAACAAG 1020
ATCTGACACC CTCTTCTGGA GTGTCTGAAG ACAGCTACAG TATACTTACA TATAATAAAT 1080
AAATAAATCT TTAAAAAAAA AAAAAAGAGA GAAAGAAAGG TGTAAGACAC ATGATTGGGG 1140
CCAGTCCAGG TTCATACTGT AACACACCAG AGTGCTGGGG CATCAAGTGG CATTGTGTGA 1200
CTCCCTCACA TGGGGAGGAA GCTGTCTGTG TGTCTTAGTG TTCCAGAGCA TCCTGTCCCC 1260
AGCATTAGTC TCCTCCTGGG CATTTAGGGT ATCCCTGAAC ATAGGGGGTG TGGAGTAGCA 1320
CTCTCATCCC TAGAACTGTG CTTCTGCTAC TTGGCGGTCA AAGTACACAG GGGTCTTCTC 1380
AAAGAAACCA AGAAATTAAG GGGTCCTGCC CCAGGCCTGT CCAAAAGCCA GATACCCCTG 1440
CACCTGGTCC TGGCTGATGG TGGCCTGGAG TCCAGAAATT GGCAGGGCCT CCACTGCCCA 1500
AGCAATCCAA GGCACTATGC CTGCTTGCCT CCTTTTTAAA CGGCTCCATT TATTTTTACT 1560
TTGAGTGTGA ACGTTTGCCC ATTTGTTTGT CTCTACAACA TATGCAGGCA GTACCCACAG 1620
GGGCCAGAAG 1630