EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM028-01542

Organism

Mus musculus

Tissue/cell

Cerebellum

Coordinate

chr1:174122760-174123480

Target genes

Number: 18
Name	Ensembl ID

Vangl2	ENSMUSG00000026556
Copa	ENSMUSG00000026553
Ncstn	ENSMUSG00000003458
Pex19	ENSMUSG00000003464
Dcaf8	ENSMUSG00000026554
Pea15a	ENSMUSG00000013698
Gm17224	ENSMUSG00000092085
Casq1	ENSMUSG00000007122
Atp1a4	ENSMUSG00000007107
Igsf8	ENSMUSG00000038034
Atp1a2	ENSMUSG00000007097
Kcnj9	ENSMUSG00000038026
Kcnj10	ENSMUSG00000044708
Pigm	ENSMUSG00000050229
Slamf9	ENSMUSG00000026548
Igsf9	ENSMUSG00000037995
Tagln2	ENSMUSG00000026547
Dusp23	ENSMUSG00000026544

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3	MA0041.1	chr1:174123198-174123210	GTTTGTTTGTTT	+	6.32
Foxd3	MA0041.1	chr1:174123202-174123214	GTTTGTTTGTTT	+	6.32
Foxd3	MA0041.1	chr1:174123206-174123218	GTTTGTTTGTTT	+	6.32
RREB1	MA0073.1	chr1:174123301-174123321	CCCCTACCCACCCACTCCCC	+	7.08

Enhancer Sequence

TAAAGGAAGT AAGTGGCTAG CTGAAGACAT TCGTTTCTAT TTGTGCATGT AACTGTTCGC 60
ATTCCTCCTT GTCATAGGAA GGAATAACTG CTGCTCAGCT CTTTAAAGGT GTTGCTCTAA 120
CACTGTCTTC TGCCTTTCTC CCTGCATCTC TGGGACAGTC CTGAGCTCTG AAGTGCTTCT 180
GCTTAGAAGG TAGAAAGCAT CTTCAGGAGA TGATGCTATT TTACATTAAA GCATCCAATC 240
TTCTCAGTGG CCGACCTTGG GCATCCTTTG CTAATCTAAT CTAGCTCAAT ATTAGCTTAG 300
TGATAACTCA AAGAGTGATT TATTGGGACA GAAGAGAGAG AGAGAGACAG AGAGAGAGAG 360
AGAGCGTGTG TGTGTGTGCG TGCGTGTGCG CGCGCGCACA CACACACATA TCCTTGGTTT 420
TCAGAGACAG ACTTTCTTGT TTGTTTGTTT GTTTGTTTTT TTTCCATTTT TTATTAGGTA 480
TTTAGCTCAT TTACATTTCC AATGCTATAC CAAAAGTCCC CCATATCCAC CCACCCCCAA 540
TCCCCTACCC ACCCACTCCC CCTTTTTGGC CCTGGTGTTC CTCTGTACTG GGGCATATAA 600
AGTTTGCGTG TCCAATGGGC CTCTCTTTCC AGTGATGGCC GACTAGGCCA TCTTTTGATA 660
CATATGCAGC TAGAGTCAAG AGCTCCGGGG TACTGGTTAG TTCATAATGT TGTTCCGCCT 720