EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM028-01491

Organism

Mus musculus

Tissue/cell

Cerebellum

Coordinate

chr1:172962440-172965510

Target genes

Number: 28
Name	Ensembl ID

U6	ENSMUSG00000064448
Atf6	ENSMUSG00000026663
Gm9929	ENSMUSG00000053925
Dusp12	ENSMUSG00000026659
Fcrlb	ENSMUSG00000070524
Gm2962	ENSMUSG00000089838
Fcgr2b	ENSMUSG00000026656
Fcgr3	ENSMUSG00000059498
1700009P17Rik	ENSMUSG00000026649
Sdhc	ENSMUSG00000058076
Pcp4l1	ENSMUSG00000038370
Nr1i3	ENSMUSG00000005677
Tomm40l	ENSMUSG00000005674
Apoa2	ENSMUSG00000005681
Fcer1g	ENSMUSG00000058715
Ndufs2	ENSMUSG00000013593
Adamts4	ENSMUSG00000006403
B4galt3	ENSMUSG00000052423
Ppox	ENSMUSG00000062729
Usp21	ENSMUSG00000053483
Ufc1	ENSMUSG00000062963
Dedd	ENSMUSG00000013973
Nit1	ENSMUSG00000013997
Pfdn2	ENSMUSG00000006412
Klhdc9	ENSMUSG00000045259
Pvrl4	ENSMUSG00000006411
Usf1	ENSMUSG00000026641
F11r	ENSMUSG00000038235

TF binding sites/motifs

Number: 9

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

NFIC	MA0161.2	chr1:172964202-172964213	TCTGCCAAGAA	-	6.02
POU6F2	MA0793.1	chr1:172964485-172964495	AGCTCATTAT	+	6.02
ZNF143	MA0088.2	chr1:172962473-172962489	TTCCCATAATGCATCT	+	7.25
ZNF263	MA0528.1	chr1:172963033-172963054	CTCTCTCCATTCCCCTCCCCC	-	6.42
ZNF263	MA0528.1	chr1:172965234-172965255	GGAGGAGGGAGAAGAAAGGAA	+	7.64
ZNF263	MA0528.1	chr1:172965228-172965249	AGAGAAGGAGGAGGGAGAAGA	+	7
ZNF263	MA0528.1	chr1:172965231-172965252	GAAGGAGGAGGGAGAAGAAAG	+	8.16
mix-a	MA0621.1	chr1:172965360-172965371	AATTAATTAGG	+	6.32
mix-a	MA0621.1	chr1:172965357-172965368	CCTAATTAATT	-	6.32

Enhancer Sequence

CTATAAAAAT CAGCTTTTCT GTTTCTATGT CCCTTCCCAT AATGCATCTG ATTTTTGTCA 60
TATGTACTCC CTATTGTGCC TAGGCATAAG ATGGTAAATA TCAGAGTGTC TGTAAAAGGT 120
TATTAAGGGC ATTGGCATAT ATCCCAAACC TATTCAAGCT GCGTACACTC TTCTGCTCTT 180
CATACCCAGA TACACTGAAA ATACACACGA ATATTAGAAA CTATTTAAAA TTGATTGTTG 240
CCAGGGCTAG GGAGACTTAC GTTATTATTC ACAGACTGAG TATTAGAGCC CAGTGTGGGT 300
TGGGGGTGGG AGAGTTCTGA GCTTACTCTC TGAGTGTTGT TTGGAGATAG GTAAGTGTGC 360
CAGAGTACTA ACATGTAAGA ACCGGACCAT CTAGTGCATT ATAGCAAGAG TGTGTGCATA 420
CATAACCCAA GACCAAGTTG GGGTCCCGGG TGTTAGCATT TTGTCTAGGC TCCGCCCCAC 480
AGTTACCTGG CAACAGCCCA GGTATGCCTG ACTCACTATA AAAGAGGCTG CTCACCCCCC 540
TCCGGTCTCT CTTGCCTTCT TGCTTTTCCT CTATCCTCTC ATCCCGCTCC CCCCTCTCTC 600
CATTCCCCTC CCCCATTCTC TCTCCACGTG CTCAGGGCCG GCCTCTACGT CTCTGCTATC 660
TCCTTCTCTC TGCCTTCCTC TTGCCTCTAC TACCCTCTCA ACTTCCCTCC CTACGCCCTG 720
AATAAACTCT ATTCTATACT ATACCTTCGT GTGGCTGGTC CCTCAAGGGG AAGGGATGCC 780
TCGGCATGGG CCCGCGGAGG CACCCCCTTC CCCGACACCT AACTGCACCT CCGCCGAACG 840
TATTCCTTCC CTCCTAACTC TTTATAAAAC ACAACACCAG GGTAGTAAAA TGTCTTCTGT 900
GATTGTTTTT CTCACCTACA ATGTGCCAGT AGGTGCTGAG AAAGTCACGT GAACAACTCC 960
GTCGCATCCC AAGTTGTTCT CATCCTTTCA TTCTCGTGGG CAAAACAGGC AGGTAGCGGA 1020
GGCTGGAAGC CTGCAGAGGA GGTTCATTTC GGGAGAGGGC GTGAAAGCGG GAGTTTACTA 1080
GGCAAGAAAG AGAAAGGAGC TGCAAGTCCA GGACAAAGAT TCAAAAGACA AACCGTGAGT 1140
TTAGGAGGTG CCGTTCGACC TATTGGGTCT AAAAGGGCCA GTGAGGGAGA AGGGACCGTC 1200
TCGGGGCCAC TTACAAAAAG ACATCGCTGT CCAAGCTAAA AAGACGGATC AGATAGCACC 1260
AGGTATTGAA GGAGTAGACG CTGATCAGGT TCGGAGTTTA CGGATGGACT CTGGGGCAGC 1320
TTCTGGAGCA GAGAATTAAA GACCTGAGAA AGGGAACCTC TTCCGGTACC AGTAGGTGAT 1380
GATGAGATTA AGAAGAAAGT AAGGTGCGGC AAGTGGAGGC ACCTGGTCCA ATATGGACGC 1440
TCCAAGAATC GGCAGTCAGG GACGGATTCA GGAGTCCTGA AATAAGAAGG AAAGCCAGGC 1500
AAAGGTGACT GGGGACAAAG AAAAGTAGTT ATCTTCGGAT CAGTATCGCT GAACGTCCAA 1560
ACTCCTACGG AGTATCAGCT TTCTATGTCT ATGCCAGCGG AGGGGAGATA GCGAGGTACA 1620
AAACATTCCC ACCGTCCCTG GGTGGGCTCG AACCACCAAC CTTTCGGTTA ACAGCCGAAC 1680
GCGCTAACCG ATTGCGCCAC AGAGACCGGT GATGCTTAAG GACGCTGTCA AGTCACCTAC 1740
TAAAGAATAT GTTGGTCGCC TATCTGCCAA GAATTGTGGT TGGAATTGAC AAAGAAATTA 1800
ACCTAACCGC AAATATAACA ACAACAACAA CAAAAAGGGC ACCATCTCCT ACATTGATAA 1860
GGAACAAGTC CAGGTTCTAC CCGCTTAATC TGAGATAAGA GGATGAACGA ACCAATAGTC 1920
TTTGGGAAAT ACAAAACTAA TGATTTCTGA GAGTTTGGGA ATTAAGTTGG ATTTGTTTAG 1980
AAACGTTGCA GGCAGGCCTA GTTAATTTAC GTAGGCAAAT GTGCGTGCGT AAGTACTGAG 2040
CCATGAGCTC ATTATTTTTA ACGTAACAAC CACGTTTCCA GGCGTGTCTG ACAAAAGTAC 2100
TAAGGGTTCT TACAACAAAA CTAGTCATGC CAGCTGTCTT GAAGTCTACT GGTTACCCAG 2160
GCAAAACAGG GGATTTTAAA ATTCTTGTAA CTTAACGATG ACACATCTGC AAACAAATAG 2220
CAAAAGGCAC ATTTCCCCTT AGTCTACTAC CTTCCGTTCA AGGGTCCTCA TCAGGACTGC 2280
GGTCTAATGA GCCATTTTCT GTATTGCCCA GGTCTCGGGA GCTTTCGGGA GCCTCCACAC 2340
ACTAGTACCT CCTTGAGTCT GTTTCTGCCG CCTCTTCCAA GAACACAGAT TAAGCACAGG 2400
TCAACATTTT CAAAGGTTTC ATACAAACAA AGATACTTAC ATGCAGAAAT TACATATGCA 2460
TACATTTTGT ATTTTTGCAT TATATACTTG TTATATAACA CACACATATA ATTTGCTACA 2520
TGACCTTTTC TTTTTCTTTT TTCTTTTTGG ATTTTGTGGT GGTTTGAATG AGAATGGCCC 2580
CATAGGCTCA TTGTGGTGGA AATGTTTGGG AAAAGATTAG AAGATGTAGC CTTGTTGAGG 2640
GAGGAGTGTC ATTTGCAGGT CGTTTCAAAA GGCCATTCCC AGTTAGCTCT CTTCTGGTTA 2700
TGTCTGTGAA TCTGGATCTA AGCTCTCAGC TATTGCTCCA GTGCTGCACC TGCCTGCCCA 2760
CTGCCAGGCT GCGTGTGACA GCCATCGAAG AGAAGGAGGA GGGAGAAGAA AGGAAAAGAA 2820
AAGAAGCAGT TAAAAAGAAC AAAAACAACA AAGAAAGAAA CTGCCGAAGA AAGCCAGCAT 2880
AGCAGGAATC ACAGCGTACA CCAGGACTTA AGTACCACCT AATTAATTAG GTGTCTTTCT 2940
AAATGGTTTT TATATAGTAG AGCAAATACA GATACTAAGT CTTCATACAA TATTCTAAAG 3000
GCTGAAAGTT GAAGGAGTAA GTCCCAGAAA GGAGAGTCAT AGGAGGGAAA GTCAACTTGG 3060
GGGGGGGCGG 3070