EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM028-00497

Organism

Mus musculus

Tissue/cell

Cerebellum

Coordinate

chr1:72465080-72466770

Target genes

Number: 7
Name	Ensembl ID

U2	ENSMUSG00000075752
Pecr	ENSMUSG00000026189
Tmem169	ENSMUSG00000026188
Xrcc5	ENSMUSG00000026187
Gm15843	ENSMUSG00000085812
March4	ENSMUSG00000039372
Smarcal1	ENSMUSG00000039354

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EBF1	MA0154.3	chr1:72465543-72465557	TGTCCCAAGGGAAT	-	6.47
RREB1	MA0073.1	chr1:72466299-72466319	CAGCAAAACACCACCCAACC	+	6
TCF3	MA0522.2	chr1:72465518-72465528	AACACCTGCT	+	6.02

Enhancer Sequence

CTCAATGTGA GCTCTCAGCT GTTGTTCCAG CGCCATGCCT GCCTGCTGCC ATGTTCCCTG 60
CCACAATGGA GATGGACTCC TACCCCTCTG GGATTGTAAG CCATAAACAA ATGTTTCCTT 120
TTCTAAGTCG CCTTGGTCAT GGTATTTGAA TCATAGCAAT AGGAAAGTAA ACTGAGACAG 180
CAGGTGTCTG TGTTTTGTTC TTGTTCCACA GATATGTAGC TATTGTGCAT ATTGTTCCAT 240
CTGTTGCATT ATTCAGTTAA TATAATTTTG AGGTCTTTTT CTGTCAGTCC CTTCGGGTTT 300
GTGACATTTT CTCAGATGCC AATGGTGTAA CAGGGTGTCC TCCCCTCCAT TTGCACAGAC 360
GTTTAGGTCC TTTCCAGTCT GTAGCACTGT AGCGATGACA CTACACCCGT CCTTGTTTCC 420
CAAACTCTTT GCAAATGCAA CACCTGCTAC TGTCTTTCAT CAGTGTCCCA AGGGAATGGA 480
ATTTCTGGGT TGAAGGGTAT GTGCACTTTA AGTTTATAGA ATACTAGCGA GTGGCCCTCA 540
AAATTAGCAC ACTGATTGAT CCTCCTACTC ACAGCATGGA GAAGATGCCC CCAGATGGCC 600
TGCCCGCATC CCTGCCCATC TGCTTCTCTC TTGATGTATT CTGTAGCAGA AACGCAGCAG 660
GGTAAACAAT CACTTTTGCA GTCCCTAACA GTGGCTTTGT AATGCATTTC TCATACCAGA 720
ATGATACAGA GGAAATATCT AGGCATTGAA GCATGGTCCT GAGAAAGCTC TAGCTTTTTC 780
CTGACATAAA GTAGGGGAGT GGCTGGGGCA TGGTCCCCTT CCTTCTTTTT CTGCTTTGTG 840
CTTTCTTAGA CCACTTGGTG TTGTGAGGTT ATAGCCACAG GTGACAGACC AGCATGCTAG 900
GATAACAAAG CAAACAAAAG GAGCTTAGAT GATTAGTGCC AAAACCTATT GCTAGTGGCA 960
GCAAGCCTGA TGCCAGCAGG TAACGAGTCT GGACAGCTCA TTGTAACAGG AAAATAAGCC 1020
CTTCCTGTTT AACTCCTCCT GGCTGGGTAT CTGTAACTTT GTGGCTGAAT GAAAACATAA 1080
AGTTAGTTGG ATCTTAGTGC TGGGTATCCA TTTCTGCTTT AGTTTAACCA TATATATTAC 1140
ATCAAGAGAG AAGCAGATGG GCAGGGATTC GGGCAGGCCA TATATATATG AGACAAAACG 1200
TCTCTTCACA TGTTTGCCCC AGCAAAACAC CACCCAACCG ACTTTCCAAA GACCCCCTCA 1260
AGTTTCCACC TCACAAAGTG GCCAGTTGTC AAGCAGCCTG CGGCATTTTC AAATGCACAA 1320
TATGAGGGTA AGCTTTGGGG TTTGTTTTTC TATAAACACA TGGGCATCCT GAATACTGTC 1380
CTGCAAGTTA TAATTTTGAA TAAACAAAAT GACTCAAGGC CTGTGTGTGA GGACATGCGC 1440
GGTCAGTCCT AGGAGCCACA GCGACGCCTC TGGCTTTAGA GATTGACTCA GGTCTTACTT 1500
TCAGCTTTGC TTCTCACTTT TCCAGTATTC TGAACCTGGA CTTCTGTCTT GTAGAGTCAC 1560
AACTGGTTTC TATCCCTTCC TAAGCCCTTA AATCAGCTAT GCTCATAAGT CTGTCTGGTT 1620
TCACCATAGG GCCATTTCAT TATCTCCCCC AATTCAATTT AAAAAATGTT TTAAAAAAAG 1680
ACACTCTTGA 1690