EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM028-00431

Organism

Mus musculus

Tissue/cell

Cerebellum

Coordinate

chr1:63161530-63163030

Target genes

Number: 8
Name	Ensembl ID

Gm11603	ENSMUSG00000081429
Gm11602	ENSMUSG00000084799
Ino80d	ENSMUSG00000040865
Ndufs1	ENSMUSG00000025968
Eef1b2	ENSMUSG00000025967
Snora41	ENSMUSG00000064602
Zdbf2	ENSMUSG00000027520
Adam23	ENSMUSG00000025964

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

IRF1	MA0050.2	chr1:63162493-63162514	TCTTTCTTTCTTTTTTTTTTT	+	6.25
POU4F2	MA0683.1	chr1:63162674-63162690	CTCATTTAAAATTCAT	-	6.29

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_10600	chr1:63160765-63161807	Embryonic_stem_cells
mSE_10600	chr1:63162122-63162740	Embryonic_stem_cells

Enhancer Sequence

ACAGGTTTTA CGATATTATT GTTTTCCATG TTAACTTTTT CCATAAGGGT GACAGTGGCA 60
GCTTACTTTT TTTTTTCTAT TTTTTTTTCT TTTTTTCAGG CTAATAATGA TTTTTCTCTA 120
TGGCAGGTCC AAGTTCTGTA TCTGGTGGCC AGTCTGTAAA TTGGCACTTG AGAGACTTAG 180
AGGTCACGGT ATTGTCTTTA TTTAATGCTC GTTTATGTTG TATGTATTCG TACTTATGGT 240
TTCATGTATT AGAGGTAAGA TTTTGTGGTT TTGGTATCTG AGGAACTGAG GCTGCTGAGA 300
GTCAATTGTA AAGAGATGGC TTTTGTCTTC TCTCAGAGCA ATGTAAGTAA AACCTATTGA 360
CTGCCCAGAA AGGCATAATA CAGCTGTTTA TTTTTCACGG TGCAAATAGA AGTAGTGTGT 420
ATTTAAACTC TCAGGACAGC TGAGCAAGCC AGTTCATCTA TCAGCCCAAG AAGAAAGATG 480
ACTCCTATAA ACCTAGCAAC AGATTGAAAG ATGCCTTGGA TTTTCTTCAA GTAAAATTAT 540
TTATTAAGAA TTATATCTAG AATTCCATTT CTGTTATTTT CTTTTAGTTT GCATAGATTG 600
ATGAATGTCT AGGCCTTTGG TACATTGCAT ACTTTGCTGC CTGCTTCTTG GAACACAGAA 660
TTGAGGGGTA GGCTTCTCTT CCCTAGTGTT GGAATGTTCA GAACTTCCGG TGTAGTGTCA 720
GCCTGTTGAG CGACTTTGTA CATTGCAAAG ATGTAATAGG TTTACTTTTT TTAAGTGATT 780
TTTTGTTTTA TGTACATTGG TGTTTTGCCT GCGTGTATGG CTGTGTGAGG GTTTTAGATG 840
CCCAAGAACT GGACTTACAG ACAGTTGTGA GCTGCCATGT GGCACTTGAG CTGGGTCCTC 900
TGGAAGATCA GCCAGTGCTC TTAACCACTG AGCCATTTGT CCAGCCCCAG AATCTCCTCC 960
CTTTCTTTCT TTCTTTTTTT TTTTTTTAAT GAACAAACTT TAGCACATAA ACAGGATCAA 1020
AGAAAAAGTG CACCAGGCAT GGAGACAGCC AGCTGCTGCT GCAGCCTGAC ATGTCCATGG 1080
CGGAGGTGTT AGGAGAAGTA GGAACTAGCC AGGCTTTTTG TATGTTGCAA GGGAATTAGG 1140
GATGCTCATT TAAAATTCAT TGCAAAGCAT TTTAGGTGTA ATTGATGTTT AAAATGCCTA 1200
TTTCTGAGTT ATAACTTTTT TTTAAAAAAT ATTTATTTAT TATATGTTAA GTACATTGTA 1260
GCTGTCTTCA GACACCCCAG AAGAGGGCAT CAGATCTCAT TAGGGATAGT TGTGAGCTAC 1320
CCATGTTGCT GCTGGGATTT GAACTCAGAA CCTTTGGAAG AGCAGTCAGT GCTCTTAACT 1380
GCTGAACCAT CTCTCCAGTC TCCGAGTTAT AACTTTAAGA TGAATTCAGA TACTATTTGT 1440
CTGGGGAGCT TTATTATCTA AATTTGAATA TAAAACCTTC TGTGAGTTTT TCCTCCTTCA 1500