EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM028-00213

Organism

Mus musculus

Tissue/cell

Cerebellum

Coordinate

chr1:37640260-37643810

Target genes

Number: 9
Name	Ensembl ID

Inpp4a	ENSMUSG00000026113
4930439A04Rik	ENSMUSG00000086064
6330578E17Rik	ENSMUSG00000026112
Unc50	ENSMUSG00000026111
Mgat4a	ENSMUSG00000026110
2010300C02Rik	ENSMUSG00000026090
Tsga10	ENSMUSG00000060771
Lipt1	ENSMUSG00000037216
Mrpl30	ENSMUSG00000026087

TF binding sites/motifs

Number: 17

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

BHLHE40	MA0464.2	chr1:37642936-37642946	GTCACGTGAT	-	6.02
ELK3	MA0759.1	chr1:37642715-37642725	ACCGGAAGTA	+	6.02
ETV1	MA0761.1	chr1:37642715-37642725	ACCGGAAGTA	+	6.02
ETV4	MA0764.1	chr1:37642715-37642725	ACCGGAAGTA	+	6.02
EWSR1-FLI1	MA0149.1	chr1:37640551-37640569	CATTGCTTTCCTCCTTCC	-	6.3
IRF1	MA0050.2	chr1:37643186-37643207	TGCTGGTTTCGCTTCCTCTTT	+	6.04
IRF1	MA0050.2	chr1:37643192-37643213	TTTCGCTTCCTCTTTCTCTTT	+	6.6
Lhx3	MA0135.1	chr1:37643682-37643695	AATTAATTAATTT	-	6.92
NRL	MA0842.2	chr1:37641117-37641130	AATAGTGCTGACA	+	6.11
POU6F1	MA0628.1	chr1:37643683-37643693	ATTAATTAAT	+	6.02
POU6F1	MA0628.1	chr1:37643683-37643693	ATTAATTAAT	-	6.02
RELA	MA0107.1	chr1:37643129-37643139	GGAAATTCCC	-	6.02
SREBF2(var.2)	MA0828.1	chr1:37642936-37642946	GTCACGTGAT	-	6.02
Srebf1(var.2)	MA0829.1	chr1:37642936-37642946	GTCACGTGAT	-	6.02
TFEB	MA0692.1	chr1:37642936-37642946	GTCACGTGAT	-	6.02
USF2	MA0526.2	chr1:37642932-37642948	TGGGGTCACGTGATTC	+	6.41
ZNF263	MA0528.1	chr1:37640547-37640568	CCCTCATTGCTTTCCTCCTTC	-	6.2

Enhancer Sequence

CATATATGCA CATCTGCACG TATACATCCA CATTCACACA CACATATACA CATGCACACA 60
TACACACACG CACGAACGCA CACACACATC TCTGAGGGCC CCACCTTCAT AACCTAGCCA 120
GTTCTAACGA CCTCATTTAT AATCCCATCC CACCAGAGGC TACATTTCAA CGCATGAGTG 180
TGAAGAATGG GCATCAACAT TCAGAACCTG CTCTGCCTGT TTCTACCACC AGACTTGTTT 240
AATGTCTATG TCCTGTGAAT CAAGACCCTC TTAACACAGT ACCTCCTCCC TCATTGCTTT 300
CCTCCTTCCC AGTGCACACC CAGAACCTAG TTCTTGGGTG AACTTAAAGA GCTATGTCTC 360
AGGAGTATGT CTGCGCTTTC TGAGCTCCAG AGAATGAAGA TCTAACTGTT GGGTTTTGGA 420
AACACCTGGT CACTGGGTCC TGGCCAGGTG CTCCTGAATG CTGTCCATTG TGTCCTTGGG 480
GAGACATGAA AACTGTGCCA GGACATGTGC CTGGTTTTTC TTCCAGCAGC CAACCCTACC 540
TTTTCCGGTC ACGTTAAAAA TACGTCTGAA ACACCTGCCC ACTTGCTGCA GCTTTCGCTG 600
GCCCCACCTT TGGTAAATAC ACAGCTGCCA CCACCCCTCT CTCTCTCCCC CCAGCTTGCT 660
CTCATTGATT ATTTCTGAAT CGCGGACTCT CTGACAGCTT GGCTATGCCC AGGAAGGCGC 720
TGATTTGCCT CTTTATGGAA GCAGTGTGAT TCTTGGATTG TGACCCTCTC TGGTATAAAG 780
GATCAGAAAG GACTTTGGGG TTTAGCTGCT GGCACAGGGC CTCCTGGAAA AACGTCAGGC 840
ACCCTTGGAG GTGTTTAAAT AGTGCTGACA GGAAAGGACA TCCACCACAG ATTTATAATC 900
TGTACCTTGC TAGGGGCCAA GACCAGCACA ATGTACAAGG AATCAGTTGT TTAAACTAAG 960
CAGGAAACAG ATGCTTTCTG TTAAGCTGCT TATTATCAAA GTACCTGTCA AGCATCCCGT 1020
GGTTAGAATG TCTCTGGGAA GCTAGGAGAA CTCCAGGTAC CTGGCCTGCT CTCCTGTCAA 1080
ACCCTACATC CCCGCACTGG GCAGTTTCCT TCTGGCATGG AAGAACTACA TGTTTCCCCA 1140
TGGGATGAGA GGCTTTGGGA AGAATCCTAT AGGGATGAAG TTTGGTTGCA ATAAAGGTGG 1200
AAGACCCATG ACAACAAGTG TTGTATGTAT TTGAGTAACT TCATGTGGGA GCACTGGTAG 1260
GTGTGTGTGT ACCTGTGTGT GTGTGCATGT ATGTGTGTGC ATGTGTATGT GTGTGTGTAT 1320
GTGTACATGC ATATGTGTAT ATGTGTGTGC CTGTGCTTGT GTATGTGTTT GAATGTGCTT 1380
GTGTGTGTAT GTGTGTATAT GTATGTGTTG TGTCTGTCTG TATGTATATG TGTATATGTA 1440
TGTGTGCCTG TGTATGTGTG TGTGCATGTG CTTGTGTGTT TATGTATGTG TGTATATGTG 1500
TGTGTGTGCA TGTGCTTGTG TGTTTATGTA TGTGTGTATA TGTGTGTGTT TGTGTATGTG 1560
TGTGCATGTG TGCTTGTATA TATGTATGTG TGCATATGTG TATATGTGTG TACCTGTGCT 1620
TGTGTGTATA TATGTGTGTA TATGCTTGTG TGTGTATGTG TGTACATGTG CTTGTGTATG 1680
TATGTATATG TACGTGTATG TGTGCATGCA TAGTCATGGG AAAGCATACA AAGCATTCCT 1740
TTTGAGCTGT GTACCAACTT CCAACCAATA TGAATGAACT TTTACCTTCC TCCAAGCTGG 1800
CTTAGGACCA CAGAGGGAAT TGGCTTTGTT CCTCTACTCT AGTGACGCCA CCCCTTGCCC 1860
CTGAGTATTT CCAGTCCCAT AGCCACTATC CACTAGAGCA GTGGGAGGGC TCAGCGAATG 1920
CATTTTCTTA TGGCCATTGC TCACCAACCT GTTTATGAAA GAGGTTTGAG GCGTGACAGC 1980
CAGTAAATCT CAGTGTTGCA TAAGGACAGA CACTTGTTCT CGCAGTATAT TTGAAGCCAC 2040
TGTTGGGGGT GCCACTCAGG ACTCTCCAGA GAAACAAAAC CAGGAGCAGA GACACACTTG 2100
TGAAGATGCA CGCATACACA GAAATACCCT CTCCTCTGTC TGTTGTGAGC TTAAGTCCTG 2160
ACAAATCCAT TGCAAGTTAA AAATAAATAC CAAGTTTAAA AAAAAAAAAA AGAAAAGCAT 2220
TCAATACATC CAGCCTAGCC CACCATGCTT GGTCACTTAA TAGTCTGCAG CATGGCAAAG 2280
GTATCCACCA TCAAGCTTAC CCTGCAACTG ACTGTCACAG GAACCATCCT GAAGTCGGCC 2340
TGTGAGAACA GAATGGGTAT GTAGATACTC ACCATTAAAA CTCGCCACTG GAAGCACACT 2400
GGGTCTGCAG ACTAAGAGAA ACATTACATT CAAAGGAGAG CTGAGTGACA GGCACACCGG 2460
AAGTACTGAG TCATCGGTTC CCGGCTGGAA CCTGCTCACC GTGCCAAGAC TGCATTGCCA 2520
GCCTAGGGCT GGAAGAAAAC CCAAACCTGA AGCGTGGTTT CTACTGAGTG ACTGACTGTC 2580
TTTGTACCAC AATGAAGTTG GGACTGCAAA AGCTGAACCA TCGCAAACCC AGGACAGTGT 2640
GTCTGTGCAG TGTGGAGGTC TGCGGTCAGC TGTGGGGTCA CGTGATTCTG AAGGCCCAGA 2700
AGGCTCCTCC ATGTGCCATC TGTCAGTTGG AACAGAAAGG CTCATGGCAC AGTTCAGAGG 2760
TATGAGCTGG AGAGCCAAAG GCATAAGTTC TACTTGGGTT GAAGTCTTGA GAAGCAGAGG 2820
CCCAGAAAAA GAGGAAAGAC CGATATCTTC TCACAGAAGC CTGCTGTGCG GAAATTCCCA 2880
GAGCCTCAGT CATACCCTGG CATGCTGCCG CTGCAGCTGC ATTTTCTGCT GGTTTCGCTT 2940
CCTCTTTCTC TTTAACCTCA CAATATAGCT GCTAGCCTGG TCTCTGTATG GGAGGGGTCT 3000
GCATTCTGTG AGCCTAATTC AACAGTACAT GCTGAGTACT TAGCCTTTGG CAGATGACAC 3060
GTAAGACACA TCAAAACAAT CATCCATCAT GATCAAGTAG GCTTCATCCC AGGGATGCAG 3120
GGATGGTTTA ACATAATCCA CTATATAAGC CAACTCAAAG ACAAAAACCA CATGATCATC 3180
TTGTTAGATG CTGAGAAAGC ATTTGACAAA ATCCAACAAC CATTCATGAT AAAAGTCTTG 3240
GAAAGATCAG GAATTCAAGG ACCATAACTA GACATAATAA AAGCCATGTA CAGAAAACCA 3300
GTAGGCAACA TCAAACTAAA TGGAGAGAAA CTTGAAGCAA TCCCACTAAA ATCAGGGACT 3360
AGACAAGGCT GCCAACTTTC TCCCTACCTA TTCAATATAG TACTTGAAGT CCTAGCCAGA 3420
GCAATTAATT AATTTTTAAT TAGCAATTAA AAAGAAGATC AAGAGAATAC AAATTGGAAA 3480
GAAAGAAATC AAAATATTTT GCAGATGATA TGATAGTATA TATAAGTGAC CCTAAAAATT 3540
CCACCAGAGA 3550