EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM028-00133

Organism

Mus musculus

Tissue/cell

Cerebellum

Coordinate

chr1:33982990-33985940

Target genes

Number: 8
Name	Ensembl ID

Prim2	ENSMUSG00000026134
1700001G17Rik	ENSMUSG00000044744
Rab23	ENSMUSG00000004768
Bag2	ENSMUSG00000042215
Zfp451	ENSMUSG00000042197
Gm15455	ENSMUSG00000081402
Bend6	ENSMUSG00000042182
Dst	ENSMUSG00000026131

TF binding sites/motifs

Number: 10

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

DUX4	MA0468.1	chr1:33984127-33984138	TGATTAGATTA	-	6.32
E2F6	MA0471.1	chr1:33983857-33983868	GGGCGGGAAGG	+	6.62
Foxd3	MA0041.1	chr1:33983047-33983059	AAACAAACAAAC	-	6.32
Foxd3	MA0041.1	chr1:33983051-33983063	AAACAAACAAAC	-	6.32
ONECUT2	MA0756.1	chr1:33985489-33985503	TTTATTGATTATTT	-	6.4
ONECUT3	MA0757.1	chr1:33985489-33985503	TTTATTGATTATTT	-	6.91
RREB1	MA0073.1	chr1:33985598-33985618	CCCCCAACCACCCACCAGTA	+	6.29
ZNF263	MA0528.1	chr1:33985360-33985381	AGAGGAGTGAGGGAGGAAGGA	+	6.25
ZNF263	MA0528.1	chr1:33985355-33985376	GAAGGAGAGGAGTGAGGGAGG	+	6.42
ZNF263	MA0528.1	chr1:33985368-33985389	GAGGGAGGAAGGAGGAAGAGG	+	6.45

Enhancer Sequence

GTCTGTAGAG TGAGTTTCAG GACAGCCAAG ACTGCACAGA CAAACCCTGT CTTGAAGAAA 60
CAAACAAACA AACAAAAAAC CCCCTAAACC AACCAACCAA CCAACCAACC AAAAATACCT 120
GGCATTTTTG ACATTGCAAT TAAGTTTCTC ATTATATTTC TTTTTTTAAG ATTTATTATA 180
TGTGTATGAG TGTTTTGCCT ACGTGCATGT AAGTGCACAA TGTCTTTGCC TGGTACAGCA 240
GAGTGTATCG GAGCCCCATG AACTTGACTT ATGGCTATGA GCCACCATGT GGGTGCTGGG 300
AACTGAACTC TGTAAAAGCA GCCAGTGTTC TTAATCACTG GGCACCCTCC CCCCCCCCTT 360
TTTTTTTAAA GGATGGGAGA TCTATAAAAA TAAGTTTAGA AACCTGTTGT GACTTATTTT 420
CTGGGAGACG TGAGCTGATG TCTGTTCACT CAGATGGGGC ACTGAAGATA GACCAAAGCA 480
GTGACTTCAC TCTGTTAGCT TAGTGAGTTT ATCCAAGCGC CTCATAGGAG CATAGGTGAC 540
TCAGGCGGCT TCATCACCTC AGAGCCATCA CAGCCAGCGA GGTGGTGACT CGGGACTGAC 600
CTGCTGGCAC TTTTAGCAGC AGCCTCTCCC CCAGCAACTG TTTACTGCTT ATATAATACT 660
GGGGACAAGG GGCTTGTAAG TCATGTAAGT TCAAGGAGCT TTCTGCTTTT TGTAAGTTTT 720
GCTCACTTCC TGTGCCTTCT AAGCTTCCTC CCCAATCTAA GGAAGAAGGA ATGCTTAAAT 780
GTGGAGGACA AATATAACTG GAAATAAAGT GTAAATGTCA CCAAAATGGC TCAGCCAGTG 840
TTCAAGGACA GTGGACAAAG CCTGGGCGGG CGGGAAGGGG AGGGCTTCCT GAGCTTTTTG 900
TCCGTAGCTT CGATTCTCTA GAGAAGTGTG TCTGTCCAGA GCTCTGTATC CCTCCCCCGC 960
TCCTCATGAC TCAGAACGGC TCCACCTCTT CCAGTTTAGA CTGCTGACTT CTTTCTCTGT 1020
CTGCATACTC TCCTGGTTCT GAGACATCCC GGGCTCTTGA GGAATGCCTC ATCTAGTCTA 1080
GTTACTGCTG CAGATGCTCG AGAAAGCCCA CCTGATGCTT ATCGTCTACT GGGAGCTTGA 1140
TTAGATTAAT ACATACTTCG GCCATGAGTG AGACACACGT TTGGTGAGAA TGCGAGGGTG 1200
TTTCCAGAGA GGGTTAGCCA AGGATTGAGA TCACCCCTGC TGTGGCAGCA CCCTGTCCTA 1260
TAGGCTTGGG GTTCTCGATG AAACAGATGG GAAAAGGAGA AAGCCACCTG CACTCTGGTA 1320
TTCCTTTCTC TGTTTCCTCA TTGGTACTTC GGACCAAACT ACTTAAAACA GTGGCTGAAG 1380
AAATTAGCCA CTTGAGTTGT AAGTGTACAA ACGGCACGTT GGTGGTTTGG GCTGTGTGGG 1440
TGACTCTCAC CTGTTCTCAG CAGGTGCTGG TTTCTGCATT CTTGAGCTAC TTCTGACCCA 1500
CTGCGATTCC TTACACACAA CCTGTCTTTT GCTGGCAAGC TGATAGAGTT TGGCTCATAC 1560
GTGGTTAAGC TGGCTGCAAG GCACAGGATG CAGAATGCTG GAGACCTTGA GATACAGGCT 1620
CGTCACTGAC AGACTTTTCC TACTCTCCTC TTTGACAGTT CTAATTTCCG GTTTTCCATA 1680
CACATAGAAA TTACTTTTAG CTAAGATCTT TAGACCTAAC AATTTACATT TTTTTATTAG 1740
GTAATAAAAT CCATTATTTC TGTGTGCTAA AAATTAATAA AAAAATAATG CTTATCTCAT 1800
CCTGCACCCA ATTTTATTGA GATACCAACA TCCAGTTTTA TGATACTTTT CATAATTCCA 1860
GGAACATTAT CCATGTTCTG TTTGCAGTCA GCCTTTGGTC TTACCCCGAG ATTCCTAATC 1920
TTTTGGTGTC TATCGATCTG TCTTTCCTTG GCACTAGCGT TAGTAAAGTC CCATGGCTAG 1980
ATATATCATT TTCTGTAAGA ATTCTTTCTG TGGGTCTGTC CGTACCCTGA GTGCCTACCA 2040
ATGAGCATGA TGAAGGCTCT GAGGGCACTT GAATATAAAT ACTCTGTCTC CCCAGAAGTG 2100
TTAACCGTGA CTTTCATGAG CTGTTCTGAA AACTCCCAAA GTTAACATCC CACACAGGAC 2160
CGGAGAGGAG TAGGAACCAG ATCTCATCGT TCCTGAATTT AACAGTATTT AAGTTTCTAT 2220
TTGTGATTGT TTCATTTTAA AAATTAAAGC ATAAATAAAC GGGTAAATAG GGTTCAGGAG 2280
AAGACAATGG GAAGGGATAG AGGACGGACA AGAGGACACA GGACATGAAT GAGGGAAGAG 2340
CCTAGAGGCC AGGGCTGCAC AGGCAGAAGG AGAGGAGTGA GGGAGGAAGG AGGAAGAGGG 2400
ACGAGGGCTC TGGGAAACAT GCTGTGTCCA AGAATGCAGT GTCCATTAAC GCAGAGTTGC 2460
TGAGTTCCTT GATTAACCAA TTAAAAGTAA GATAACTTTT TTATTGATTA TTTTATTTAT 2520
TCACATTTCA AAAATTGTCC CTCTTCCGGG TTCCTCCTCC ACGAGCACCC CACCCTACCC 2580
CCCTTCCCTT TGCCTCTGAG TGGGTGTTCC CCCAACCACC CACCAGTAAG ATAACTTTAA 2640
AAAAAGAAAA AGATTGATAT TTTACCAAGA CTTGCTCGCT TTGCTTTGGA ATGTCTTCCA 2700
ATAGGAAGAG CCGCTTGGAA AGCTTGCAGA AGCCCTCTGC CTTCTCCAGC AGCTCCCTCA 2760
CTGGAGCGAC TGAGGGGGTC ATTTGTTGAA TGCTTTTGAA ATCACACTCT AGAGTTAGTC 2820
AATTATTTAC TTAAAACTTG AAACTTGCTA ATGGTCTACT GCATTATTAT TATTATTATT 2880
ATTATTATTA TTATTATTTT GAAGTAGTCT GTCTCATAGT CCAAGCTATC TGTAAACTGT 2940
CTGTGTAGCT 2950