EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM027-15399

Organism

Mus musculus

Tissue/cell

CD8+

Coordinate

chr6:124643640-124644840

Target genes

Number: 23
Name	Ensembl ID

Pex5	ENSMUSG00000005069
Lpcat3	ENSMUSG00000004270
Emg1	ENSMUSG00000004268
Phb2	ENSMUSG00000004264
Ptpn6	ENSMUSG00000004266
Grcc10	ENSMUSG00000072772
Atn1	ENSMUSG00000004263
Eno2	ENSMUSG00000004267
Lrrc23	ENSMUSG00000030125
Spsb2	ENSMUSG00000038451
Tpi1	ENSMUSG00000023456
Usp5	ENSMUSG00000038429
Cdca3	ENSMUSG00000023505
Leprel2	ENSMUSG00000023191
Lag3	ENSMUSG00000030124
Ptms	ENSMUSG00000030122
Mlf2	ENSMUSG00000030120
Cops7a	ENSMUSG00000030127
Chd4	ENSMUSG00000063870
Gapdh	ENSMUSG00000057666
Mrpl51	ENSMUSG00000030335
Tapbpl	ENSMUSG00000038213
Cd27	ENSMUSG00000030336

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

HNF4G	MA0484.1	chr6:124643826-124643841	TGGACTTTGCTCTCC	-	6.38
NR2C2	MA0504.1	chr6:124644798-124644813	TGACCCTTGACCCCA	-	6.61
Nr2f6	MA0677.1	chr6:124644798-124644812	TGACCCTTGACCCC	-	6.81
RXRB	MA0855.1	chr6:124644798-124644812	TGACCCTTGACCCC	-	7.28
RXRG	MA0856.1	chr6:124644798-124644812	TGACCCTTGACCCC	-	7.17
Rxra	MA0512.2	chr6:124644798-124644812	TGACCCTTGACCCC	-	7.1

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_07546	chr6:124643151-124645201	Intestine
mSE_08586	chr6:124642062-124647304	Liver

Enhancer Sequence

TGAGTAATTG TACAAGTGTA CAGGAAATAA GGAGCTAACA CTAACACAGG CAGTGTGACG 60
TCCCCGGTCC CAAACACAAC TCAGTGAGAA GCACAGAGAC CCCAGGGAAT AGTCTCACTG 120
TGCTGTTAAC CCGCTGAACC TGGAGTCCCT GCCCCTAGCT GCAGCCCGTC AGTACACAGC 180
ACATCCTGGA CTTTGCTCTC CTTAGAACGA GCCCTGTTCT AACAGGATCC TTGACCTAGG 240
GCCCCGATGC TTCACCAGCG ATAACCTCCT TCAGCAATCA GAAAGGAGGA AGACTGAGTT 300
CTACCACAGG TTCTCAGATC CTCTGACCAC CGATATTAAA ACCTGTTTGG TGAGATTAAA 360
CAAAAGCCAG TGGCCTGTCA AGCTCAGGAT TCCATTCCCA GGGCCATTGT TAGGGTTTTA 420
GTGGTACTGA GGCCTACTGC TCGTAGACTT GTGTGCAGCT CATTTTTAAA GTACATGGCC 480
TTCCGGTTAG ACTCTGGTGT GCAAGCAGGT GCACGTGTCA CGGTGCTTGG TGTTCTTGAC 540
GATTCGTAGG TGATGGTTGC CACTCTTATC AAGCACCAGT TCCCACAAAG AAAGAATTAA 600
GACTTGGAAA TAGCTTGTAG GGCACCACTC TCCCTAAAAA CAGCTTCTCC CTGAAGGGGT 660
GACCTAGCTG CCAGGCTGCC AAGCCTGCTG AGCTGGGCAG CTGCCAAGAG CAAGGTTCAG 720
TGTTTACATA CCCACCATGG GCCGGGGTTG TCACAGCAAC TCACCCAGCA CAGTTTGTCC 780
CCTCCTTCCC TTGGCAACTT CCGAGCAAGC TTTGCCCTCA CCTCTTGTGG TCTCGGTGTT 840
CTGGGTAACC CCGCTTTCTC TGTTCTTTTG ATTTTCCTGC CTGTACTTCA GCTTCTCACA 900
TACTCCCCAG TCTGCGCTAT ACTGACCTGA GTGGGACCAT GCAACCTGCA CTCCTCCCAA 960
CTTCCCAAGC CAGGTCCCCT GCAGCAGCCA GAACCAAAGC TAGCTGGCCT GTACAGCGTC 1020
TGCAGGAGCA CGCCCGAGAC CCTGGCTCCT GCCATGTCTG CTTTCTTGGT CTTATAAAAT 1080
TATGCTTTCT AAATTCCCTG GTAAGTTAGA AATCGGGGAA GGATCTAGGC TTGGCTGGCC 1140
TGTTGAAAGC TCAAGACGTG ACCCTTGACC CCAAAATAGC AAGGGAAAAG ACAGGAAAAA 1200