EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM027-10173

Organism

Mus musculus

Tissue/cell

CD8+

Coordinate

chr2:29642580-29643020

Target genes

Number: 8
Name	Ensembl ID

Rapgef1	ENSMUSG00000039844
Gm13547	ENSMUSG00000075425
Trub2	ENSMUSG00000039826
Slc27a4	ENSMUSG00000059316
Urm1	ENSMUSG00000069020
Cercam	ENSMUSG00000039787
Odf2	ENSMUSG00000026790
Gle1	ENSMUSG00000019715

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3	MA0041.1	chr2:29642915-29642927	AAACAAACAAAC	-	6.32
PAX5	MA0014.3	chr2:29642659-29642671	GTGGTCACGCTT	-	6.32
USF1	MA0093.2	chr2:29642954-29642965	ACCACGTGACC	+	6.32
USF2	MA0526.2	chr2:29642952-29642968	GAACCACGTGACCTCA	-	6.42

Enhancer Sequence

GGCTACATGA CAGTTTTTAA GAAAATAAAA GAAAGGAAAA AAAGGCAAAG AAAAAAATTG 60
GTGTTTGAGG GTCGGGGTGG TGGTCACGCT TGTGATCCCA GCATCTGGCA GGTGGAGTCA 120
GGAGAGTCAG AATTCTCAGT GCCTCACTGA TTTCAAGGTC GGATTAATTA GAAAAGACCC 180
TGTCTCAAAA GGCAAAAAAA AAAAAAAAAA AAAAAAAAGT TCAAATTCTA ACTCTGTAAC 240
AGAAACCGCG AAAAAAAACC CAACACTATA GAATGAATTT CTCTAAAGGA AAATAGCGGA 300
GAGTGGGTAG TAACGAAATG TGTACAAGAG AAAAAAAACA AACAAACAAG AAACAGCTAC 360
AACCCGGCAA ACGAACCACG TGACCTCACT CCACATCAGA AAGAACTAAA GCAAAACCGT 420
GGGTCCGCGT CGGAGTTCTC 440