EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM027-04904

Organism

Mus musculus

Tissue/cell

CD8+

Coordinate

chr13:23711510-23712780

Target genes

Number: 26
Name	Ensembl ID

Gm11331	ENSMUSG00000082593
Zfp322a	ENSMUSG00000046351
Hist1h4h	ENSMUSG00000060981
Hist1h2af	ENSMUSG00000061991
Hist1h4f	ENSMUSG00000069274
Hist1h1d	ENSMUSG00000052565
Hist1h3e	ENSMUSG00000069273
Hist1h2ae	ENSMUSG00000069272
Hist1h2bg	ENSMUSG00000058385
Hist1h2bf	ENSMUSG00000069268
Hist1h4d	ENSMUSG00000061482
Gm11398	ENSMUSG00000080741
Hist1h2be	ENSMUSG00000047246
Hist1h1e	ENSMUSG00000051627
Hist1h2ac	ENSMUSG00000069270
Hist1h2bc	ENSMUSG00000018102
Hist1h4c	ENSMUSG00000060678
Hist1h1c	ENSMUSG00000036181
Hist1h3c	ENSMUSG00000069310
Gm11336	ENSMUSG00000080999
Hist1h2bb	ENSMUSG00000075031
Hist1h2ab	ENSMUSG00000061615
Hist1h4b	ENSMUSG00000069266
Hist1h4a	ENSMUSG00000060093
Hist1h3a	ENSMUSG00000069265
Hist1h1a	ENSMUSG00000049539

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3	MA0041.1	chr13:23712450-23712462	AAACAAACAAAC	-	6.32
Foxd3	MA0041.1	chr13:23712454-23712466	AAACAAACAAAC	-	6.32
Foxd3	MA0041.1	chr13:23712458-23712470	AAACAAACAAAC	-	6.32
Foxd3	MA0041.1	chr13:23712462-23712474	AAACAAACAAAC	-	6.32
Foxd3	MA0041.1	chr13:23712466-23712478	AAACAAACAAAC	-	6.32

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_05883	chr13:23712177-23715261	E14.5_Limb
mSE_06466	chr13:23711231-23715201	E14.5_Liver

Enhancer Sequence

ATCCATGTTG AGATTTTTTT AAAAACCTGT ATTTGCTTTT CTCCTAGCCA CACTACTTCT 60
CAGCCTCTCT ATTTCCTTGA TTTATTTTCT CTGCCATCAT CTCTTCCCTA AGCACAAGAT 120
GCCAGTCTGC CTGGTGAAGA CACAGCTACA TCTGACAGAC CTGGATTTTC CTCCTTCTGG 180
CTTCAGCCTG CTTCCTGCTT TCCAGGTGTA ACAAGTGCAC CACCACTATG GGCAAGGGGC 240
ACCTAGGACA CATACTTGTT GAAAGCTGCC AAAGACGTGA ACTAAGTAAC TGTTTAAGAT 300
ACAGTAACAG AGAACCTAAT CATCCCTGAT TGCTTTTCCT TCTGCCAGAG CATAATCTCT 360
GCCAGTGGCA AATCCAGTCA CATTGAAATT GGCCTGCTTG CAAAGCAAGC ATCTACAAAC 420
AACCACATTT CTGTGGGAAC TCTTGTCTTA AACCCTTTTT CTATAAGACA CATACCTTAT 480
AAAAAGAAAA GGTTGTGGGT TGGAATGAAG AAGAAAGCAA AAGCTCCAAT TGAAACGAAA 540
TTGTTTGAGA GTGCTCATTT GTGCTCAAGG AGAGCAATCT CGGGATGCTA AGGTCGGTTC 600
AGTCTCTAGA AGAGGAACTT GGATACGTAA GCGCACAGAT AAAGAGCTGC ATGCTTAAAA 660
CATCTTTAGT TAATTTTAGT ACCTATAATT GATAGCAAAT TAACTATTCT GAACTTGTAT 720
GCCATGTGGA TGTATGTGCC AGTGAGTGTG TGGTTCCCTG AAACCATTAC GATCACCCTC 780
ATTTCCAGGG CACCACCGAG TTCACATAAA CACAAGTTTG AAGCATGAGA ACCCTGGCAG 840
GCATGGTAGT ACACGGGAAT AAATTTCACT TGGGAAGGAT TGAAAATTCC GGGCTAACTT 900
GGCCTATACT TCTTGATCAC ATGTCCAACA GATTGAGAAA AAACAAACAA ACAAACAAAC 960
AAACAAACAA AAACCAAAAA ACCGCATAGT TTTAAGTTTA AGGATACTTG AAACAACAAC 1020
AACTCATTTG TTGAAAGAAT GCCTGGCTCT TTAAAGTCCT TGAAATCATT CGTGCAAATG 1080
CGCACTTGGT TTGTTTTCTT GGTAACAGGC TTGGTGCTCT GCCAGCTTCC TGGGCAATGC 1140
AGGAGAATGG CAGTCTGGAT CAACTGAGAT ATGACGGTTA CTCGCTTTTT GTAATGCGGC 1200
ACGATGCAGG CAATGTGCTT TAAAATGTAA TTGATGCCCA TGGCCTTGGA TAAGATGCTC 1260
ATGTTGGGGC 1270