EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM024-05190

Organism

Mus musculus

Tissue/cell

CD4+Treg

Coordinate

chr18:67882710-67884090

Target genes

Number: 8
Name	Ensembl ID

Tubb6	ENSMUSG00000001473
Afg3l2	ENSMUSG00000024527
Gm17669	ENSMUSG00000091695
Cep76	ENSMUSG00000073542
Psmg2	ENSMUSG00000024537
Ptpn2	ENSMUSG00000024539
Seh1l	ENSMUSG00000079614
Cep192	ENSMUSG00000024542

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

ALX3	MA0634.1	chr18:67882980-67882990	TCTAATTAAA	+	6.02
HNF1A	MA0046.2	chr18:67883111-67883126	CGTTAATGATTAGCA	+	6.02
HNF1B	MA0153.2	chr18:67883112-67883125	GTTAATGATTAGC	+	6.21
HNF1B	MA0153.2	chr18:67883112-67883125	GTTAATGATTAGC	-	6.29
NRF1	MA0506.1	chr18:67883959-67883970	CGCGCAGGCGC	-	6.14
Nr5a2	MA0505.1	chr18:67882857-67882872	GAGTTCAAGGTCAGG	+	8.25

Enhancer Sequence

GCGGCACTCT GCTAAATCTA ATGTACCCAC AGACCTGCAA GTTCACACAC ACAAATCCAC 60
TAGAATTTGC ATTTAAGATT TTCTACAACT TCTTTCCAGA ACTTTGACAC TGGTAGTTAG 120
AAGACTAGGA CTTCAAAGCC AGCCTAGGAG TTCAAGGTCA GGCAGGTCTA CAAAGCAAGT 180
TCTGAGCCAG CAAAAGTTAT AGACTGTGAG ACCTTATCTC AAAGGAGGAT GGGAGAAATA 240
AGTCCTAAAC AAAGCGAATT TTTACTGCCA TCTAATTAAA TGAAATGGTG AAAACCCAGA 300
GTCATCCAGA GCTAAAAGAA AGCTTTCTAG CTTCTTTCTG TACTGTAGTA ACAAGCCAAA 360
ACATAAGGAG ACACCAATCA CTAAATCTGA TCTGGGATAG ACGTTAATGA TTAGCAATGA 420
ATCATTTTTA AGGGGAGAAA AGTTTTGCCT GGATTAAAAG GTAGCCCACA CGCTGTAAAA 480
AGGTAGTCAC AAGCGTTCAT AGGAAAGAAT ACTTTAGAAT GAGCTGAATA GGTAAGGTTA 540
TTCTCTGGTG ACAGAGCACA GCGGCGGCCT ATAGACATGT GGCCTCTTTT GGACCGAAAG 600
ATTGTTGGGT TACTTTTGAG TGCTACGACG ACCAGTGCAC TCATTTGGGA AATGCAACCA 660
ACTGCAAGGC TCATATAAAT TCCTGTGGTG TACTATATAT ACATCTATAA AGTATGCCTA 720
AGCAAAGGAA ATTCTAAAGA GGACGCTACT TTAATCAATG GTAATACAAC CAAAGCCCCT 780
GTTGTTCCGG GGAGCTCTAA GCAGAAGATG ACCCGCTCTC CCAGAGAAAG TGGCCAATGA 840
AAAGACTGGC GATCCCCGAT CCCTCAGGAG CTTAGGCCGC CGCTTCAGCT CCGGCTCTGG 900
TATAGAGCTC CGGCCACAGG CCCCCGGGAC ACCCGCAAAT GACCGAGACT CCGTGGGACC 960
CCGCTTTGCC TTCGCTGGCC CCGATCCTAG AGGGCTCTCT CGCCCTTCTC GCTGCTCCCG 1020
CTACCAGCGC GCTCGGCCAC CGAACATTCG GCCGACAAGA ACACGGTCAG CGAGGAAGCC 1080
GGAGCCCGTC CCACCCCGCG CCGGGTGCCC CTCGACCCTC CGCCCGGCGC ACCACACGCC 1140
GAGGCCGGCC GGGCCGCCAG CAGGCGCCGC TGTGGCGCCG CCTTCAGAAC CAACAGGCGA 1200
CCGGCACCTC GGTGCTTCAG GTCTAAGCCT CACAGCGGTG AGGACTGTCC GCGCAGGCGC 1260
GCCCCTGACG CGGCCCGCGC TCGCCACTTC CGCCCGAGCG GGAGACGGGG GAGGTGACAC 1320
GGAGCCGGCA GGCGCGAGCT CCGACCCTCG GAAGCCCCGG GACGCCGCGC GGGCCTAAGA 1380