EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM023-10064

Organism

Mus musculus

Tissue/cell

CD4+CD8+

Coordinate

chr5:122784610-122785240

Target genes

Number: 15
Name	Ensembl ID

Ccdc63	ENSMUSG00000043036
Ppp1cc	ENSMUSG00000004455
Hvcn1	ENSMUSG00000064267
Tctn1	ENSMUSG00000038593
Pptc7	ENSMUSG00000038582
Gm15842	ENSMUSG00000083909
Rad9b	ENSMUSG00000038569
Vps29	ENSMUSG00000029462
Gpn3	ENSMUSG00000029464
1500011H22Rik	ENSMUSG00000029463
Arpc3	ENSMUSG00000029465
Anapc7	ENSMUSG00000029466
Gm15846	ENSMUSG00000079906
Atp2a2	ENSMUSG00000029467
Ift81	ENSMUSG00000029469

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

HNF4G	MA0484.1	chr5:122784613-122784628	AAGGTCCAAAGTTCA	+	7.41
Nr2f6(var.2)	MA0728.1	chr5:122784613-122784628	AAGGTCCAAAGTTCA	+	6.49
RARA	MA0729.1	chr5:122784613-122784631	AAGGTCCAAAGTTCAAAT	+	6.19
Rarb	MA0857.1	chr5:122784612-122784628	AAAGGTCCAAAGTTCA	+	7.01

Enhancer Sequence

CCAAAGGTCC AAAGTTCAAA TCCCAGCAAC CACATGGTGG CTCACAACCA CCCGTAATGA 60
GATCTGATGC CCTCTTCTGG AGTGTCTGAA GACAGCTACA GTGTACTTAC ATATAATAAA 120
TAAATAAATC TTTAAAAAAA AAAAAAAAAA AAAAAAAAAA AACCGAGGCA TGTGCTAACC 180
AAGAGTGAAT CATAGAGGGG AGTCTTTGTC CTGCCCTGAA GGTGGAGTTT AAAGGACACT 240
CCACTCTTGA AGCTGGGTAG CTCTGTGACT GCGCTAATCA GCAGGAAAAG GCAAAGCAAG 300
GCCACCACCT GTGCCAAACT AGTCTCAGCA GCCAGCTGGC ACGCCCCAGA TACTGCCTCC 360
AGATCTTTGG GTGCTTCTAG CTCATCACTG CCTAACCACA GCAGGTGAGG CCCCAAGTGG 420
CAACTATACC TCTGAGTCCC ATCAGCCTGC AGAGTCCTGA GAGGTAGAAA GGACTGTCCC 480
AGCTACGATG TTTTGGAATG GCTTGCTGTC AGCAATAAAC AACAACCAGA ATACCATGTG 540
TCTTTTTACT TCATCTATTT TTGTCTGTCT GTCTGTCTGT CTCTATCCTA TCTATCTATC 600
TATCTATCTA TCTATCTATC TATCTAAAGT 630