EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM023-10051

Organism

Mus musculus

Tissue/cell

CD4+CD8+

Coordinate

chr5:122109690-122110300

Target genes

Number: 9
Name	Ensembl ID

Naa25	ENSMUSG00000042719
Erp29	ENSMUSG00000029616
Gm15547	ENSMUSG00000082265
Mapkapk5	ENSMUSG00000029454
Aldh2	ENSMUSG00000029455
Acad12	ENSMUSG00000042647
Brap	ENSMUSG00000029458
Atxn2	ENSMUSG00000042605
Fam109a	ENSMUSG00000044134

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Nr5a2	MA0505.1	chr5:122109726-122109741	AAGTTCAAGGACATC	+	6.5
RARA	MA0729.1	chr5:122109718-122109736	AGGGTCAGAAGTTCAAGG	+	7
Rarb	MA0857.1	chr5:122109717-122109733	GAGGGTCAGAAGTTCA	+	6.12

Enhancer Sequence

CTGGCACTGA TGAGGTGGAA AAGGCAGGAG GGTCAGAAGT TCAAGGACAT CTGATTCCAA 60
TACGTAGAGA ACATAGATTA TCTTTTCTCC AATATATAGG GTTCTCAGTA TCTTGGGCTA 120
CTCAAGACCT TGTCTCAGAA CAACTCAAAA CCTCAAAACA ACTAAACAAT GGCCAGACGG 180
TGGTAGGGCA GGGCTGTATC CCACAACTCC AGAGGCTTAG GCAGGCAGAT CTCTGAGTTC 240
GAGGACAGCC TGGTCTACAG AGTGAGTTCT AGGACAGCTA GGCGTACTTG GAGCAACTCT 300
GACTTGGAGA AGAAAACAAC AAAAACAAAC AAAAAATAAA ACAAAACCAA ACACATCCAA 360
ACCACAAAAC CAAATTTAAC CATGACCTAT AGGCTTCCCA GCGTATCCCT GTCTCTTACA 420
CAGCGTTTTG TATCACACAA CCGAGTGGTT ATGCAATAAC TAGCTCAGGA TCGCACGAGT 480
GCTGAAGCTT GTCCTGTCTG GGGCTGTTTT CTGTGTCCGC AAAAATAATC ATCCCACGCA 540
GCCCCGCAGT GCCCGGCTCT CAGTGGATTA TCTGTGAAGT CATTGCGCTC CTAGCCAGCC 600
CCTCGCCATA 610